10 homologs were found in PanDaTox collection
for query gene PHATRDRAFT_50546 on replicon NC_011699
Organism: Phaeodactylum tricornutum CCAP 1055/1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011699  PHATRDRAFT_50546  predicted protein  100 
 
 
705 aa  1451    Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009374  OSTLU_29618  predicted protein  20.71 
 
 
744 aa  60.8  0.00000008  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_011669  PHATRDRAFT_42688  predicted protein  26.49 
 
 
700 aa  60.5  0.00000009  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009355  OSTLU_29142  pentatrichopeptide repeat (PPR) protein  25.53 
 
 
632 aa  50.4  0.0001  Ostreococcus lucimarinus CCE9901  Eukaryota  decreased coverage  0.00572015  n/a   
 
 
-
 
NC_009359  OSTLU_92797  predicted protein  34.15 
 
 
837 aa  48.1  0.0006  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.189677  normal  0.345791 
 
 
-
 
NC_009370  OSTLU_2458  pentatrichopeptide repeat (PPR) protein  28.72 
 
 
377 aa  45.4  0.003  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.0995914 
 
 
-
 
NC_011672  PHATRDRAFT_44446  predicted protein  26.14 
 
 
1354 aa  45.8  0.003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_011689  PHATRDRAFT_49258  predicted protein  27.27 
 
 
1167 aa  45.4  0.003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_003296  RS04706  putative PPR repeats containing protein  24.09 
 
 
1373 aa  45.4  0.004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.380322 
 
 
-
 
NC_006679  CNJ01300  conserved hypothetical protein  25.31 
 
 
760 aa  45.4  0.004  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.00232907  n/a   
 
 
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