| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29618 |
|---|
| Symbol | |
|---|
| ID | 5006682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009374 |
|---|
| Strand | + |
|---|
| Start bp | 534310 |
|---|
| End bp | 536599 |
|---|
| Gene Length | 2290 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | 640422103 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001422624 |
|---|
| Protein GI | 145356823 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAGC CGAAGCCGAA GGAGCGGGGG GATCGGGAAC AGCGGAATCT GAACGAACAT
CACGCGCGAA GGGAACAACA GCGCGCGCGG CACGATGGCG CGGTGAACGG CGCGGGCGGT
GGGAAACGGG GGGGGGCGAG AGATTTGGAG GATTTGATCG CGCGCGTCGA GGACGCCGAG
GACGCTGCGG CGGTGGAGCG CGTGTTGCGG CAATCCGTCT TCAAACCGGG CGCACCGGCG
TACACGACCG TAATCAAGGC GTGTGGGAAA GCGTCGCAGT GGGAAAAAGC GCTCAAGGCG
TACGAGATGA TGACGAAGTT ACACGGCGCC AAGCCGAACA CGATAACGTT TTCGGCGTTG
ATCAACGCGC TGGGCAAGGC AAAACAGTGC GACAGGGCGT TTCAAATCTT CGACGAGATG
AATGATCGAG GAATCGAGCC GAACATTTTC ACTTACTCCG CACTTTTGGG CGCGTGTGCC
AGGGCGAAGC AGTACCAGAG AGCGATGGAC ATCTTTCAAG ACTTGATTGA AAATCATCGC
GACGTCGAAG TCGATCGAAT CACGTACGGC GCCGCGATTC AGTGTTGCGT GCAAGGTCGG
CGAGCGGACA AGGCAATTGA AATTTTCGAG CGAATGCTTG CGTCTGGAAT CAAGGGGAAC
ATCATCACCT ACAACGCCGT GCTGATGGCG TGCGAGAAGA GCGGCGACTC GGATGGGGCG
CAGGAGATGT TTGAACGCAT GAGCGCCGAG CAAGTTCCGA TGGATCGCGC GACGTTTCAC
GCCATGATTG GCGCGTGCGA TCGCGCTCGA CAGCTTTCCA AAGTGATGGA CTACTATCAC
ATGATGCCAG AGCGCGGCGT TACGCCAGAT GCGGGGACTG TGTCGAACGT TTTGATGGCG
TGCAGTAACG CCAAGGACCC TTTAACGGCG ATTAAAGTGT ACCACGACGC TCGAGCGAAG
TTTGACGTCC ATCGCACGCC CGGCATGTTC AACAACCTCA TCGGTGCGTT ACACCGTGGC
AAGCGATATG ACTTGGTTTA CGAACAGCTG TTTCACGATA GTATGACGCA AAGTGCGCTC
TCGGTGTCGA CGTACGTTCA TCTCATGATG GCGTGCGAGC GATTCGGTAA CTGGGAGAAA
TCTTTTCAAC TTTTTGAAGA GTTCAAAAGA CACTCTCCTT CGAGCGTAGA TTCATACGTC
TGGACGCGAG TGTTTTACGC GTGCGGACGA TTTGAAAGTG ACGATCCGGT ATGGAAGAAT
GGAGCCATTC CTGGGTACAC GAGTCCGACG CTCCAACGCG CGCAAGCCAC GATGCGAGCG
CTTTGGGCCG AGTACAAGTC GAAATTGAGC GTGTTTAAAG AAATCAGCGC GGTGGCGGCG
CGAGTCAGCA GAGCTGGTAG CAATCATCCG TCGGCACAAA GTGACGTCGA CGCGTCTCTC
GCTTTGGCGT CGGCGAAGCA TTCAGAGCTC GCGCAGACGC ACGAGGCGGC GCCCGCCGCG
GAGTCAGCCG TCGAACAAGA ATTCGTGCAA TTGATCAACG CATACAGATC CGCCGCGGCG
GCGGCAGCGC GATGCTCTGA TCCGAGCACG GTTCTAGATA TCCTTCGCAC GTGCGAGTAC
GACGGAATTC CACAGGATTC GGTGATTTAC GGCGCTTTCG TCGCCGCGCT CGCCCTCAAC
GGCGACCGCG TGGGGGCGAA TGAAAAGTTC AGAGAGATGT TCACGTTGGG ATTACAGCCG
GGCGTGGCGG TGTACGCTGC GCTCGCGCGA GCTGCTGCAC GAGCGGGTGA CGCTAATACC
GCGCTCAGTC TCGCCGAGGA TGTGAGATCC ATGGTCGGAA GCTCGGTGGG CGACGGCGCC
ATCATCGACG CGGTGGTGGC GGCGTGCGAG GCCGGAGGGG ACTGGACGCG CGGCGCGAGT
TTGTTCACAA TGTGGGCGGC AAATGGCGTC CAGGGGGCGA ACGACGAATT GCGACGTGCA
ATCGCGGCGA GCAGTGGCCT CGATCCGGGG CCCACGAGAC GGGGCACAAG TGTGTACAAC
GCTTTCCGAC GCGAACCGCC GGCTGAGTCC CAAGGCGTCG CCGCCCCGCG AGATGCAAAA
ACGACGACGC TCACGGCGAA AGTTCAACCG TTCGTCCCGC GGGGAAGACC TTCGGTGCTG
CGTGACGACG CAAAATCGAG CGAATCGAAG TCACCGCCAG ATGAAGGAGA AAATCCTCCG
GACGAAGCTT TGTGAATGGG CGCCGCGGCG TCTGACAACC GACGAGTCGA GTCGTTTCAT
TCACCGACGC
|
|---|
| Protein sequence | MVKPKPKERG DREQRNLNEH HARREQQRAR HDGAVNGAGG GKRGGARDLE DLIARVEDAE
DAAAVERVLR QSVFKPGAPA YTTVIKACGK ASQWEKALKA YEMMTKLHGA KPNTITFSAL
INALGKAKQC DRAFQIFDEM NDRGIEPNIF TYSALLGACA RAKQYQRAMD IFQDLIENHR
DVEVDRITYG AAIQCCVQGR RADKAIEIFE RMLASGIKGN IITYNAVLMA CEKSGDSDGA
QEMFERMSAE QVPMDRATFH AMIGACDRAR QLSKVMDYYH MMPERGVTPD AGTVSNVLMA
CSNAKDPLTA IKVYHDARAK FDVHRTPGMF NNLIGALHRG KRYDLVYEQL FHDSMTQSAL
SVSTYVHLMM ACERFGNWEK SFQLFEEFKR HSPSSVDSYV WTRVFYACGR FESDDPVWKN
GAIPGYTSPT LQRAQATMRA LWAEYKSKLS VFKEISAVAA RVSRAGSNHP SAQSDVDASL
ALASAKHSEL AQTHEAAPAA ESAVEQEFVQ LINAYRSAAA AAARCSDPST VLDILRTCEY
DGIPQDSVIY GAFVAALALN GDRVGANEKF REMFTLGLQP GVAVYAALAR AAARAGDANT
ALSLAEDVRS MVGSSVGDGA IIDAVVAACE AGGDWTRGAS LFTMWAANGV QGANDELRRA
IAASSGLDPG PTRRGTSVYN AFRREPPAES QGVAAPRDAK TTTLTAKVQP FVPRGRPSVL
RDDAKSSESK SPPDEGENPP DEAL
|
|---|
| |