| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49258 |
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| Symbol | |
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| ID | 7195550 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | - |
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| Start bp | 391047 |
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| End bp | 395113 |
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| Gene Length | 4067 bp |
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| Protein Length | 1167 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183985 |
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| Protein GI | 219127527 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGTCCGTGTC ATCCGGTGAA TCAACTGTCT ACTACAGAGT ATACCGTTGA GATTGCTATC
GATCTGGCTG GCGGTAGACC CGGGCATCGA AAGCTATTGA TATCCAGCGC CTGAGTATCA
TCATATCCAT CGTTAGTTGC GTTAGCACTC TCATTTTTGG CAAGGCCTTT TCGAAGAAAG
GCTGCCATTG CGGCTACCGC ACACGGTGCG ATCCTCTAAT ATGACCAACC CATCTATCTT
TCCATCGCTG TGGAGCGAGA GCTTACCTTC TACGGAGGAA GGTCGTCAAG ATGAGTCGGC
GAGGTCGCCC AAGTATGTGC ACGAAGTAAA TGTCTCTGCA GCTGGGCTTT CCTTAGGGAA
GCAGCAGCGA GAAGAACCAG GACAACAGCC TGTACATGTT TCATGGAAAG CAGATCCCGA
GTTGTCGTCC AATCAATGGA ATATGAATGG GAGTGGTGTG TTCGGAGCAA GCCACTCTTC
TTGGAACGAT CTGCACGATT CCTCGTCACA GCACTCTAGA AATAGCAGTA TTTGGGCAGA
CAACCACTCG AGGACGTCGC ATAGTTCCAG CGCAGCCTTT CATTCCGGAT CATTCTCTGG
CCTTAGAACG CAGTACGCGG ACAGTCTCGA TCCTTCCTCG AATCACACAC AAGACTCGTC
ATTCTCGAAC AGCCTCGCGC AGCTTTCCAT CGGCCCCAAC ACCTCGACCT ATGCTCACCA
GGATGGTTTG AATCCACTTA TAGTAGGCCC ACCGAGCCCA GCGTCGAGCC CGCAATCGCA
GACGGCAGCT TCTCCGTCCT TTCCAGCCTC CGATTATTAC TACTTCCCGG CCAGCAGAAA
CGATAACCAA ACTGACGCTT CGGTAATATC GAAAGGAAAC CATAGCATTC CTGATTTAAT
GAACGCCCAT TCCGGTTCAA GTGCTGGTCA AACGTGGAGT ACAGGAGGAT CATCTATAGG
AAAGAAAGCC GCTCCTCCAG GATTTGCTTC TCACCACGCA TCGAATGAGC TTTCGGCAGT
TCTCGAATCT GAATTTGCGG ATTCGATGTC GCCTCTACCG CGAACCAGCC AAAATAGTGA
CGGTACGAGC AGCAACCCCC AAGCCGCAGT AACAGCTTCA TGGTCCAACC ACGACAATTG
TCCCAAGAAA GATCCTGCGG ATAATGGGGT CAACACCAGT CAAGAATCAC GTCGTCCCAG
GCAACGCGGC AAACAGCGAG CCAACAAGCG CAAGGGAGGC GGCCGGGGTG GAAGTAGTGG
TGTCAGCAGT ACCGGCGGCC CGTTGACCCC TCAAACATCA CCGCTCAGGG AGCACAAGTC
CATACAGCAA CTATACAGTC CGCGATCTAT CAAGGACACT TCCATGGCGT CGCCATCGAC
TTTGCGTTCG ACCCAGGAAA ACGCACGGGC CTCGTATACC TCTGAATCTC TTCAACAGCT
TTCTACGGTA TCGGATGAGA CAGCTTGGGG AACGAATATG ACCGCAGATT TAGATAAGCA
TTCGTATCAC AGTCAACACA CCATTGATCG GTCCTCGCAA CATCTGTCTC CAACCAGGCC
ATCCCATCAG CCACCTATTT TGCCTACGCA ACCCCCTCTC ATTGACGATG CATCGTTCGA
TGATGATGAA GTGGACGACT TGCATGATTT TGCGGAAGAA GGGGACGACG ATGATGCGTG
GGAAGCCAAA TCCTTTTCAG CTCCATCGAG TTCCTCACCT CGCACGAAAA AGAAAGAATG
GCTACTGCGT ATGAATCGAA AATTGCAGGA AATCCCAATA GGGCAGCTCG ACCCCTCAAC
TGTCCCCCTA TCAGCTATAA TGAATGCTTG GGCCAAAACG AAAAGCGCAC AAGGAGCATC
CATGGTTGAA TTGTGGCTGA AGAGAGCGCA ACAGGAGTAC GATTCGGGTA ATCGCCAGGT
GATACCGACC ACCAAGATGT ATACCATGGC AGGTGCGTAT TGAGCAATTC TATTTCCTTT
GGCTTCATGC ATATCTCTTC TTATCTTTTT GTTGGCTTAC TTTCCTAGTG GATGCCTGGG
CTCGGAGTGG CGAAGGAGGA GCAGCCGCAC AGCATGCGGA GGCCCTTTTG CAGCGCATGC
ACCAGCTATA TAAGGGTGGT GGTCACGATG CACTCCGTCC AACCACTGGC ATATTCAACG
CCGTCATCAA TGCCTGGGCC CGTAGCAAGG AAAAAATTGC TCCAGCTCGC GCCGAGCAGA
TCTTGTCCTG GATGCAGACA CTGCACGCTT GTGACATCCA GCCAGACAAG TACACCTTCA
ATACCGTTAT CCATGCCTAC GCTAAGGCTG GTGGTACGGA AGCAGCGGCG AAAGCTCAAG
AGCTACTAAC GCGCATGCAC GCTAAGTTTA AAGAAGGAGC CACACAGGCA AAGCCAGACA
CGATCACGTA CAACGTGGTC ATTAACTGCT GGGCCAAAAG TGGTGGCAAA GGTGCTTCGA
TCGAAGCCGA AAAGCTTCTG GCTCGAATGC ATCGCTTACA CGAAATGGGA GACCCCGATG
TTAAACCAAA TGTGGTAACT TACGGAGCAG TAATTGATTC CTTTGCCAAG AGTGGCGAAC
GTGGTGCAGC AGCTCGTGCG GACTCTTTGC TTGCCAACAT GATGCAGCTA CACCAGACAG
ATCCCGTCCG GCACTCGGAT CTACTACCCA ATACGTATGT TTTCAACACT GTGATTAATT
GTTGGGCCAA GAGCAAGGAA CACGACGCTG CTTCAAAAGC AGAAGAAATG CTCGTTGCAA
TGAGTAGACT TCACGCTTCG GGAATGCCAA GCCTCAAGCC CGACGCCTTT ACGTACACGG
CCGTGATTGA CGCTTGGGCG AAGAGCGGCT ACCGTGGAGC TGCGGCTAGA GCAGACCAAC
TATTGGATAA AATGGAAGCC AAGTACATAG CTGGAGATAA AGATCTCAAG CCTAACACCT
TTACATACAA TGCCGTCATT AATGCCTTGG CAAAAAGTGG TGAAGCAGGA GCGGCTGCGC
GAGCCGAGCG AGTCTTGCAA AATATGGTAG GTCGCCACCG CAACAGTGGC GGGGAGGATG
TGAAGCCAAC GACGATCAAC TTCAATACAG TTCTTGATGC CTGGGCGAAG AGTGGCGGTG
GCAGAGCAGC AGCGGAACGA GCCGAGGAAA TTTTGGAGTG GATGGACCGT TTGCATAAGC
AAGGAAACCA TGATGTGAGA CCCGACACTA TTACCTTCAA CGCAGTCCTG GACGCTTGGG
CGCGTTCCGG CGATCGAATG GCGCCTCGCC GGGCTGAGCA GATATTGGAT CACATGGATG
ACTTGTGCCG ATCGGGAAAC AAGGGAGTCA AACCTGACAC ATACACATAT AACACCTTGA
TCAACGCTTG GGCAAAATCC GGTGAGCGCG GCTCTGCAGC ACGGGCTGAA CATGTCCTCT
CTGTCATGGA ACATAGACAC CATGACGGTG ATAACGATTT CAAACCCAAC ACTCGAACAC
ACACTTCTGT AATTGATGCC TGGGCGAAGT CTGGGGAGAA GGGCGCCGCC AGACGAGCGG
AGCAAATCCT AAACGGCATG ATAGAGCGCT ATGAAGCAAC CGCCGACCCG GACATCAAGC
CCAATGTTCA TACAGCAAAC GCAGTGTGCA ATGCTTGTGC TTTTTCGAAA CACGAAGAAG
ATCGTGGCGA GGCCTTGGAA ATAGCATTTC GCGTGTTTGA CTGGCTATCA ACGAGGTCCG
AGATGGATCC TGACTCGTAT ACCTACACTA TTCTTTTGTC AGTCTGTGCT AACCTCCTTC
CTCGTGACGA TCCTGCTACC CGGTACGCGC ACGCGCGAGC TTTTTTTGAA AGCTGCCGAA
ATACGGGCTA CGTAAACGAC TATGTGTTGC GGAAGCTTCG TCAGACTGTC AGCGATGACG
AGTACCTTGG TTTGGTGGAC TACAGGACCG AGCCATCCGC TTCCAGTATG CCGTCGTCTT
GGACCCGGAA CGCCAAATTT AGCACGGCGG GTCGTGGACG CAAGCATAAC TGGAACAACA
AGACCAATTA TAACAACAAC AACAGCAACA ATCGCCGAGG AAAGTAG
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| Protein sequence | MTNPSIFPSL WSESLPSTEE GRQDESARSP KYVHEVNVSA AGLSLGKQQR EEPGQQPVHV
SWKADPELSS NQWNMNGSGV FGASHSSWND LHDSSSQHSR NSSIWADNHS RTSHSSSAAF
HSGSFSGLRT QYADSLDPSS NHTQDSSFSN SLAQLSIGPN TSTYAHQDGL NPLIVGPPSP
ASSPQSQTAA SPSFPASDYY YFPASRNDNQ TDASVISKGN HSIPDLMNAH SGSSAGQTWS
TGGSSIGKKA APPGFASHHA SNELSAVLES EFADSMSPLP RTSQNSDGTS SNPQAAVTAS
WSNHDNCPKK DPADNGVNTS QESRRPRQRG KQRANKRKGG GRGGSSGVSS TGGPLTPQTS
PLREHKSIQQ LYSPRSIKDT SMASPSTLRS TQENARASYT SESLQQLSTV SDETAWGTNM
TADLDKHSYH SQHTIDRSSQ HLSPTRPSHQ PPILPTQPPL IDDASFDDDE VDDLHDFAEE
GDDDDAWEAK SFSAPSSSSP RTKKKEWLLR MNRKLQEIPI GQLDPSTVPL SAIMNAWAKT
KSAQGASMVE LWLKRAQQEY DSGNRQVIPT TKMYTMAVDA WARSGEGGAA AQHAEALLQR
MHQLYKGGGH DALRPTTGIF NAVINAWARS KEKIAPARAE QILSWMQTLH ACDIQPDKYT
FNTVIHAYAK AGGTEAAAKA QELLTRMHAK FKEGATQAKP DTITYNVVIN CWAKSGGKGA
SIEAEKLLAR MHRLHEMGDP DVKPNVVTYG AVIDSFAKSG ERGAAARADS LLANMMQLHQ
TDPVRHSDLL PNTYVFNTVI NCWAKSKEHD AASKAEEMLV AMSRHRNSGG EDVKPTTINF
NTVLDAWAKS GGGRAAAERA EEILEWMDRL HKQGNHDVRP DTITFNAVLD AWARSGDRMA
PRRAEQILDH MDDLCRSGNK GVKPDTYTYN TLINAWAKSG ERGSAARAEH VLSVMEHRHH
DGDNDFKPNT RTHTSVIDAW AKSGEKGAAR RAEQILNGMI ERYEATADPD IKPNVHTANA
VCNACAFSKH EEDRGEALEI AFRVFDWLST RSEMDPDSYT YTILLSVCAN LLPRDDPATR
YAHARAFFES CRNTGYVNDY VLRKLRQTVS DDEYLGLVDY RTEPSASSMP SSWTRNAKFS
TAGRGRKHNW NNKTNYNNNN SNNRRGK
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