37 homologs were found in PanDaTox collection
for query gene PC1_2123 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_2123  ABC transporter, periplasmic substrate-binding protein, putative  100 
 
 		 307 aa  630  1e-180  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.04669  n/a   
 
 
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NC_012880  Dd703_0707  extracellular solute-binding protein family 1  68.06 
 
 		 311 aa  399  9.999999999999999e-111  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
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NC_011761  AFE_1498  ABC transporter, periplasmic substrate-binding protein, putative  55.29 
 
 		 307 aa  336  2.9999999999999997e-91  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.00436727  n/a   
 
 
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NC_011206  Lferr_1216  extracellular solute-binding protein family 1  55.29 
 
 		 307 aa  336  2.9999999999999997e-91  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  unclonable  0.00000000268953  unclonable  0.0000000000401052 
 
 
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NC_007948  Bpro_2497  tungstate/molybdate binding protein  55.6 
 
 		 297 aa  317  2e-85  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.102491 
 
 
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NC_009484  Acry_0010  ABC-type molybdate transport system periplasmic component-like protein  45.76 
 
 		 304 aa  275  8e-73  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
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NC_013205  Aaci_2240  ABC-type molybdate transport system periplasmic component-like protein  37.32 
 
 		 341 aa  169  6e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
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NC_013124  Afer_1934  tungstate/molybdate binding protein  32.33 
 
 		 317 aa  138  1e-31  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0273271  n/a   
 
 
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NC_007952  Bxe_B1190  tungstate/molybdate binding protein  31.6 
 
 		 296 aa  121  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.0768198  normal  0.72552 
 
 
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NC_013158  Huta_1022  extracellular solute-binding protein family 1  29.47 
 
 		 318 aa  115  8.999999999999998e-25  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
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NC_010003  Pmob_0379  extracellular solute-binding protein  27.59 
 
 		 321 aa  101  1e-20  Petrotoga mobilis SJ95  Bacteria  normal  0.961539  n/a   
 
 
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NC_007498  Pcar_2084  molybdate ABC transporter periplasmic substrate-binding protein  27.02 
 
 		 354 aa  97.4  3e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.116873  n/a   
 
 
-
 
NC_013512  Sdel_2058  extracellular solute-binding protein family 1  32.21 
 
 		 316 aa  96.7  4e-19  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00930598  n/a   
 
 
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NC_013385  Adeg_0640  extracellular solute-binding protein family 1  27.82 
 
 		 335 aa  96.7  5e-19  Ammonifex degensii KC4  Bacteria  normal  0.0178146  n/a   
 
 
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NC_009253  Dred_1849  ABC-type molybdate transport system, periplasmic component  26.55 
 
 		 274 aa  96.3  5e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2634  molybdate ABC transporter periplasmic substrate-binding protein  26.55 
 
 		 326 aa  85.9  8e-16  Desulfococcus oleovorans Hxd3  Bacteria  unclonable  0.000000000273776  n/a   
 
 
-
 
NC_010424  Daud_0310  ABC-transporter-like protein, periplasmic substrate-binding protein  24.45 
 
 		 275 aa  82.8  0.000000000000006  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
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NC_013131  Caci_8652  extracellular solute-binding protein  25.45 
 
 		 309 aa  81.6  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007498  Pcar_2087  molybdate ABC transporter periplasmic substrate-binding protein  26.4 
 
 		 327 aa  80.5  0.00000000000003  Pelobacter carbinolicus DSM 2380  Bacteria  decreased coverage  8.28403e-19  n/a   
 
 
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NC_013926  Aboo_1405  extracellular solute-binding protein family 1  23.84 
 
 		 329 aa  80.5  0.00000000000004  Aciduliprofundum boonei T469  Archaea  normal  0.692378  n/a   
 
 
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NC_013216  Dtox_0979  hypothetical protein  28.14 
 
 		 273 aa  80.5  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.0000000446553  normal  0.0586642 
 
 
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NC_013173  Dbac_2354  molybdate ABC transporter periplasmic substrate-binding protein  25 
 
 		 325 aa  78.6  0.0000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  unclonable  0.00000000506174  n/a   
 
 
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NC_013223  Dret_0525  molybdate ABC transporter periplasmic substrate-binding protein  23.83 
 
 		 326 aa  78.2  0.0000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_2302  extracellular solute-binding protein family 1  27.48 
 
 		 636 aa  73.2  0.000000000005  Methanosphaerula palustris E1-9c  Archaea  normal  0.319071  normal  0.250502 
 
 
-
 
NC_013743  Htur_1653  extracellular solute-binding protein family 1  25 
 
 		 323 aa  72.8  0.000000000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_1406  extracellular solute-binding protein family 1  25 
 
 		 314 aa  72.4  0.000000000009  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.130817  normal  0.506549 
 
 
-
 
NC_012029  Hlac_1225  extracellular solute-binding protein family 1  25.86 
 
 		 306 aa  67.8  0.0000000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000686455 
 
 
-
 
NC_009051  Memar_1880  extracellular solute-binding protein  27.4 
 
 		 355 aa  64.3  0.000000002  Methanoculleus marisnigri JR1  Archaea  normal  1  n/a   
 
 
-
 
NC_008942  Mlab_1025  tungstate/molybdate binding protein  24.89 
 
 		 328 aa  61.6  0.00000001  Methanocorpusculum labreanum Z  Archaea  normal  0.0403292  normal  1 
 
 
-
 
NC_009635  Maeo_1470  molybdate ABC transporter periplasmic substrate-binding protein  24.03 
 
 		 349 aa  59.3  0.00000008  Methanococcus aeolicus Nankai-3  Archaea  normal  0.811914  n/a   
 
 
-
 
CP001800  Ssol_2001  extracellular solute-binding protein family 1  23.08 
 
 		 402 aa  56.6  0.0000006  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1780  tungstate/molybdate binding protein  25 
 
 		 366 aa  54.3  0.000003  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_009634  Mevan_0954  molybdate ABC transporter periplasmic substrate-binding protein  20.98 
 
 		 330 aa  52.4  0.000009  Methanococcus vannielii SB  Archaea  normal  1  n/a   
 
 
-
 
NC_009637  MmarC7_0925  molybdate ABC transporter periplasmic substrate-binding protein  22.83 
 
 		 344 aa  50.8  0.00003  Methanococcus maripaludis C7  Archaea  normal  1  normal  1 
 
 
-
 
NC_009135  MmarC5_1756  molybdate ABC transporter periplasmic substrate-binding protein  21.55 
 
 		 347 aa  47  0.0004  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
NC_011832  Mpal_0210  molybdenum ABC transporter, periplasmic molybdate-binding protein  26.79 
 
 		 314 aa  46.2  0.0008  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  0.768111 
 
 
-
 
NC_009975  MmarC6_1019  molybdate ABC transporter periplasmic substrate-binding protein  21.88 
 
 		 347 aa  43.9  0.003  Methanococcus maripaludis C6  Archaea  normal  0.884237  n/a   
 
 
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