| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1780 |
|---|
| Symbol | |
|---|
| ID | 5104780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1722896 |
|---|
| End bp | 1723996 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640507678 |
|---|
| Product | tungstate/molybdate binding protein |
|---|
| Protein accession | YP_001191859 |
|---|
| Protein GI | 146304543 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0725] ABC-type molybdate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATAGCCT TGAACAAGGG TTTAGTTATT GGTATAGTTG TGTTAGTAAT AATTGTAGTA
GGAGTTTTAG CATATGTGGA GATTGGAATG CCGAAACACG TAACTCCCTC GCCAACTACC
AACACAACTA CTACGACCAC GACGACTACC ACTACCTCTC AAACCCCGCT CTACATATGG
GTAGCTGATG CCTACACGGC AGAGGCCCAA TATCTAGGTT CGTCGTTCCA GAACGCCACA
GGCATAACTG TGCCCACTCC CAAGGGAGGC GGATCCTTCG GGCTAGCGAG GGAGATCGCG
TCCGAGGGTC CCAACGCCCA GGTTAGCGTC TTCCTTCCTG TGGCCCTCTC AGCTGCATCT
CCCTCATACC TGGGAAATTA CTCCTCCGGC TGGGCAATAG CCTTCGTAGC AGACCAGCTC
ACCATAGCTT ACACTAACTC CAGCATAAAC AATCCGTACG CACAAGAAGC CCTCAATTAC
GCCAAGGAGG CAGAGGCCGG AAACACGTCA GCGTGGTACA ACTTCTTCCA GATACTGAGT
AGCGGTAAGG TTAAGGTTGG TATCTCAGAT CCCAACACAG ACCCCGCTGG TTTTAGGGCG
TGGATTACCC TAGAGTTAGC TGGATATGAA TATGCCAACA ACACTTTCCT ATTCTACAAT
GAAATGCTGA ACAACAAGGG TAACGTGACC GCGTCCAACG CAGCTGAGCT GGTATCGCCG
TTGGAGGCGG GACAGATCAA CTTCCTATTC ATTTACAAGT CGGCTGCCAT AGCCAAGGGG
TTGGAGTATA TACAACTTCC CAATCAGATT AACCAGGGAG ATCCTAGTTA CTCGAGCCTT
TACTCTAAGT TTGAGTACAA TCTATCCACA GGACCGGTTT ACGGTTCCCC CATCTACCTC
TTCATCACTG TACCCAAGAA CGCAAATAAC CAGGCCGAGG CTCTTGAGTT CGTGACGTAC
GTGATTGAGA ACTCCCAGTC CCTAAGTAAG TTCGGCCTAC TTCCGCTGTC TCCTGCAATC
CTGTTCAACT CTACGGCAGT TCCTCCTCAG ATAGCCTCTT TACTCTCCCA GGGTAAACTG
GTTGAAGGAG GTACGCTTTG A
|
|---|
| Protein sequence | MIALNKGLVI GIVVLVIIVV GVLAYVEIGM PKHVTPSPTT NTTTTTTTTT TTSQTPLYIW
VADAYTAEAQ YLGSSFQNAT GITVPTPKGG GSFGLAREIA SEGPNAQVSV FLPVALSAAS
PSYLGNYSSG WAIAFVADQL TIAYTNSSIN NPYAQEALNY AKEAEAGNTS AWYNFFQILS
SGKVKVGISD PNTDPAGFRA WITLELAGYE YANNTFLFYN EMLNNKGNVT ASNAAELVSP
LEAGQINFLF IYKSAAIAKG LEYIQLPNQI NQGDPSYSSL YSKFEYNLST GPVYGSPIYL
FITVPKNANN QAEALEFVTY VIENSQSLSK FGLLPLSPAI LFNSTAVPPQ IASLLSQGKL
VEGGTL
|
|---|
| |