Gene Daud_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0310 
Symbol 
ID6025451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp339010 
End bp339837 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID641593164 
ProductABC-transporter-like protein, periplasmic substrate-binding protein 
Protein accessionYP_001716503 
Protein GI169830521 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCCA AACCCGATGA TTCTTTGACC ATTCTCCACG CGGGCGCCTT GCGCCACCCG 
CTCCGGGAGT GCGCACGCCT CTTCAACCGG GCGCACCCCA AGGTCGACCT GCGCCTGGAG
GCCGCCGGCT CGCTGGCTTG CGCCCGCCGC CTGCTGGAGG GCCGCCATGC GGACATTGTC
GCCCTGGCCG ACCCGATACT CTTCGAAAAG CTCCTGGTGC CCCGGCTGGT CCAGCGTTAC
TTTGTCTTCG CCATCGACCA GATGGTGATT ACTTTCGACG ACCTCTCCCG GCACAGCCGC
TACATCAACG CGGACAACTG GATGGATGTC CTTTTAGAAC CGGAAGTGAC CTTCGGCCGG
TCCGACCACA ATCTGGACCC CGCCGGCTAC CGGACCCTGA TGCTCTGGCA GTTGGCCGAG
CAGCACTACG GCCGTCCCGG CCTGTTCGAC CGGTTGAACC AAAAGTGCCG CCCGGAACAC
ATCTACGCCA AATCGGTCGA CCTGACGCCG GCCATCCGTG ATGGTCGGTT GGACTACGGG
TTCGGGTACC AGTGCGTCGC CCGGCAGGAC GGCTTGCTTT TCGTGCGCCT GCCCGAGAGG
ATCAACCTGT CCAACCCAGC CCATGCGGAC TATTACGCGC AAGCCTCGGT GGACATAGAC
AGCCCGCTTA CCGGCCTGCG CACGACAGTG CACGGCGCGC CGGTGGAGTT CGCAGCCGGC
TGCACCGAAC AAGCCCAGAA CCGGGAATTG GCGAAGGCTT TCCTGGACCT GCTCATCAGC
CGCGACGGCC AGAAAATCCT CGAGGAATCC GGCCTGGTGC CCTACTGA
 
Protein sequence
MLPKPDDSLT ILHAGALRHP LRECARLFNR AHPKVDLRLE AAGSLACARR LLEGRHADIV 
ALADPILFEK LLVPRLVQRY FVFAIDQMVI TFDDLSRHSR YINADNWMDV LLEPEVTFGR
SDHNLDPAGY RTLMLWQLAE QHYGRPGLFD RLNQKCRPEH IYAKSVDLTP AIRDGRLDYG
FGYQCVARQD GLLFVRLPER INLSNPAHAD YYAQASVDID SPLTGLRTTV HGAPVEFAAG
CTEQAQNREL AKAFLDLLIS RDGQKILEES GLVPY