Gene Dret_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0525 
Symbol 
ID8418333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp635840 
End bp636820 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content55% 
IMG OID645037089 
Productmolybdate ABC transporter periplasmic substrate-binding protein 
Protein accessionYP_003197400 
Protein GI258404658 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAAT GTCTTTCCCT TTCTCTCGGT CTTATGGCGG CGTTGTGCCT GTGCCTCGCT 
GCTGGTCCGG TTGCTGCCGA ACCAAGCGGT GATGTGATCA TCTTTCATGC GGGCAGCCTG
ACCGTGCCGT TTGCTAAGAT GGAAAAGGAA TTTGAAGCCG CGCATCCCGA AGTCGATATC
CTGCGCGAAG GCGGCGGAAG TACCAAAATG GCCCGTATGA TTTCCGACGT GGGCAAAACC
GCTGACATTA TGGCCTCTGC TGACTACCAG GTCATCGACA AGAGCCTGAT CCCGGATTTT
GCCTCCTGGA ACGTGCGTTT CGCCAGCAAC CAATTGGTGC TGTGCTATAC GGACAAGAGC
CAATATGCCG ACGAGATCAC GGCTGACAAC TGGTACGAGA TCCTGCAACG CGACGGTGTG
GTCTGGGGGC ATTCGGACCC CAACCTCGAT CCTTGTGGCT ACCGGTCGTT GATGGTGTTG
CAGCTTGCGG AGAAGTTCCA TGACAAGCCC GGGCTGTACG ACCGCCTGAT CGCCAACCGT
CCCGAAGAAA ATGTCCGTCC GAAATCGGTG GAGTTGGTTT CGTTGCTGAA AACCGGCAAC
ATGGATTACG CCTGGGAGTA CCGCTCTGTA GCCGTTCAGC ATGATCTGCA ATTCGTGACG
CTGGACGACC ATATCAACCT CGGGAATTAC AAATTCGATC CTTTCTATAA ACAGGCCAAG
GTTGAAGTCA GCGGCGAAGA GCCGGGCGAA ACCATGTTTC GCACCGGCAA GTCTATCACG
TATGGCATCA CCATGACCGA TGATGCCCCG AATCCTGAAG CCGCGACAGC CTTTTTGGAA
TACCTGTTTT CCAAAGAGGG CGGACTCAAA GTCCTCAAGG AACTCGGCCA GCCCCCCTTT
GTCCCGGCCC GTGTGCCGAG CCAAAAGATG TACGACATCC TGCCCACATC CCTGCAGGAC
AAGGTTGTGG TCAAACAATA A
 
Protein sequence
MRKCLSLSLG LMAALCLCLA AGPVAAEPSG DVIIFHAGSL TVPFAKMEKE FEAAHPEVDI 
LREGGGSTKM ARMISDVGKT ADIMASADYQ VIDKSLIPDF ASWNVRFASN QLVLCYTDKS
QYADEITADN WYEILQRDGV VWGHSDPNLD PCGYRSLMVL QLAEKFHDKP GLYDRLIANR
PEENVRPKSV ELVSLLKTGN MDYAWEYRSV AVQHDLQFVT LDDHINLGNY KFDPFYKQAK
VEVSGEEPGE TMFRTGKSIT YGITMTDDAP NPEAATAFLE YLFSKEGGLK VLKELGQPPF
VPARVPSQKM YDILPTSLQD KVVVKQ