Gene Afer_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1934 
Symbol 
ID8324031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp2023773 
End bp2024726 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content68% 
IMG OID644953058 
Producttungstate/molybdate binding protein 
Protein accessionYP_003110511 
Protein GI256372687 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0273271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTCG CCGCCGTCGC CCTCGGGGCC TGTGGCTCGA CGCAGCACGC GAGTGCCTCG 
CACACGCACG AAACCGCGAG CGTTGCCTAC GCCGGCTCGC TCGAGTACCT CAACGAGCAC
GTCATTGGGC CAGACTTCGC CCGAGCGACC GGTGACGTCT ACGAAGGACG CGGCGGAGGA
TCCTTCGGTC TTGCCCATGA CATCATCGCC GGCGAGATCA GCCCGAACGT GTTCGAGTCG
ATCGGCGGGG CGCCCATCGC CGAACTCGAG CCGCGCTTCA CTCGTTGGTA CGTGACGGTG
GCCTCCAGTC CGATCGTCCT CGCGTACAAC CCCCACACGT CGTTTGCTCC TCGTCTGGCT
GCGATCGCAG CGGGCCGAGC TCCCTTCACT GAGCTGTTCA GTCTGCTGCG AACGCCTGGC
TTCCTGCTCG GACGGACGAA CCCGGCCACC GACCCCCAGG GACAAGCGTT CTACGAGATG
GTCGAACTCG CCACCGTCCG GTACCACCTT CCGGCTTCCA CGACGAGCGC CGTGCTCGGT
AGCCTCGAGA ACCCGTCGCA GGTGTATTCG GAGACGTCGC TCGAGGCTCG GCTCGAGAGC
GGTCAGCTCG ATGCAGCGAG CGCCTTCCGC TCCCAGGCGA TCCAGCTCCA CCTGCCCTAC
ATTGCGCTCC CTGCCGCCAT CGACTTCGGT GATCCGGCGG ACGCGGCAAC GTACGCGACG
GCCTCGCTCA CCCTTCCCGA TGGCAGTGTC GTCCACGGTC ACGCGCTCAC GCTCGCGGTG
ACGACTCTCG GGCGCCACGA CCAGGGCGCG GCGATGGCCT TCGTCGACTA CGTGATCGAT
GGTGCTGGGA GGGAGGCGCT CGCGGCGGGT GGCTACACCC TGCTGCGGCC CACCGTGACG
GGGACCGGTG TTCCGCATGT CGTTCGCACC GCTGTCGCGC GCGCCGACGG CTAG
 
Protein sequence
MALAAVALGA CGSTQHASAS HTHETASVAY AGSLEYLNEH VIGPDFARAT GDVYEGRGGG 
SFGLAHDIIA GEISPNVFES IGGAPIAELE PRFTRWYVTV ASSPIVLAYN PHTSFAPRLA
AIAAGRAPFT ELFSLLRTPG FLLGRTNPAT DPQGQAFYEM VELATVRYHL PASTTSAVLG
SLENPSQVYS ETSLEARLES GQLDAASAFR SQAIQLHLPY IALPAAIDFG DPADAATYAT
ASLTLPDGSV VHGHALTLAV TTLGRHDQGA AMAFVDYVID GAGREALAAG GYTLLRPTVT
GTGVPHVVRT AVARADG