23 homologs were found in PanDaTox collection
for query gene Mnod_1786 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_1786  putative general secretion pathway protein K  100 
 
 
287 aa  541  1e-153  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.542815  n/a   
 
 
-
 
NC_010511  M446_2029  putative general secretion pathway protein K  64.97 
 
 
296 aa  317  1e-85  Methylobacterium sp. 4-46  Bacteria  normal  0.0345806  normal  0.0292856 
 
 
-
 
NC_011666  Msil_0916  putative general secretion pathway protein K  27.89 
 
 
293 aa  87.8  2e-16  Methylocella silvestris BL2  Bacteria  n/a    normal  0.576382 
 
 
-
 
NC_007964  Nham_0735  putative general secretory pathway protein K  29.22 
 
 
304 aa  79  0.0000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.374633  n/a   
 
 
-
 
NC_011666  Msil_1757  putative general secretion pathway protein K  32.39 
 
 
291 aa  72.8  0.000000000006  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_2617  putative general secretion pathway protein K  28.18 
 
 
314 aa  68.2  0.0000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3003  putative general secretory pathway protein K  30.42 
 
 
313 aa  63.2  0.000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.142574 
 
 
-
 
NC_010577  XfasM23_0775  general secretion pathway protein K  26.87 
 
 
281 aa  60.1  0.00000005  Xylella fastidiosa M23  Bacteria  normal  0.148294  n/a   
 
 
-
 
NC_011071  Smal_0552  General secretion pathway protein K  28.99 
 
 
287 aa  60.1  0.00000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0965369 
 
 
-
 
NC_010513  Xfasm12_0862  general secretory pathway protein K  26.26 
 
 
281 aa  59.3  0.00000007  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00384723  n/a   
 
 
-
 
NC_010717  PXO_02682  general secretion pathway protein K  29.77 
 
 
283 aa  58.9  0.00000009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1284  putative general secretion pathway protein K, GspK  29.47 
 
 
314 aa  57  0.0000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.325322  normal 
 
 
-
 
NC_010511  M446_1613  putative general secretion pathway protein K  33.33 
 
 
307 aa  57  0.0000004  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.435588 
 
 
-
 
NC_011146  Gbem_0588  General secretion pathway protein K  25.83 
 
 
313 aa  57  0.0000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0757  general secretion pathway protein K  26.46 
 
 
294 aa  55.8  0.0000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.408442  n/a   
 
 
-
 
NC_011757  Mchl_0033  putative general secretion pathway protein K  30.48 
 
 
296 aa  54.7  0.000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.369925  normal 
 
 
-
 
NC_008786  Veis_0682  general secretory pathway protein K  33.66 
 
 
315 aa  52.4  0.000008  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.436161  normal  0.0114744 
 
 
-
 
NC_012918  GM21_0601  General secretion pathway protein K  23.92 
 
 
313 aa  50.8  0.00002  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000025238 
 
 
-
 
NC_010581  Bind_1589  hypothetical protein  29.47 
 
 
282 aa  48.5  0.0001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.699944  normal  0.30868 
 
 
-
 
NC_009720  Xaut_2113  putative general secretion pathway protein K  31.73 
 
 
313 aa  48.1  0.0002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0302049  normal 
 
 
-
 
NC_007517  Gmet_3371  general secretion pathway protein K  26.96 
 
 
299 aa  46.2  0.0006  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.394857 
 
 
-
 
NC_002939  GSU0322  general secretion pathway protein K  26.16 
 
 
306 aa  44.7  0.002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1120  general secretion pathway protein K  24.75 
 
 
312 aa  43.9  0.003  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>