Gene Msil_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0916 
Symbol 
ID7093351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1002645 
End bp1003526 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID643464256 
Productputative general secretion pathway protein K 
Protein accessionYP_002361248 
Protein GI217977101 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.576382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG CCTCCGGCGA AAGCGGCTTT GTCATCGTTG CGGTCTTGTG GATCCTCGCC 
GCGCTGGCGA CCCTCGCCTC CGTTTACTCG TTCTATGCCA GCGCCAGCGC GGTCGCCGCC
CGCGTTTCCT CCGACCGGCT GCAGGCCGAG GCGCTGGTCT CCTCCGCTCT GGAACTAACG
GCGCTGCGGC TGCTCGGGCG CAGCGACGAC GACCCGCGCA GCCTGGGCGA ATTCAAGTTT
CGGATGGGCG GCGCCGAAAT TCTCGTGAGC TTCCGCAGCG AGGGCGGGCG AATCGACCTC
AACGCCGCCC CGAAAGAGCT GCTTGCCGGG CTGTTCAAGA CCCTCGGAGC CAAGCCTGAC
GACGCCGATT CGTTTGCCGA CCGCATCATC GGCTGGCGCA AGAAAGGCGA GGCGGGCAAA
CAGAACAAGG AGGCCGATCT CTATAAGGAC GCAGGCCTCA GTTACGCGCC GCGACAGACG
CCGTTCCAGA ATATCGCCGA GCTGCGCTTC GTCCTGGGCC TTCCGCCGGA CCTCGTCGAA
AGCTGCATGG CTTTCGTGAC CGTGTTCAAC GGCTTGCCGC AGATCGACGT CTTCGCGGCA
GCGCCCGAAA TTGTGCAAAG CCTGCCGCAT CTCGACGCCG ACGTGGCCGC GACGATTGTT
GAAAGGCGCG GCTCGCTTGA CGCCAAGGCG ATCCTGTCGC TGCTCGGGCA GGCCAAGGAC
AGCGTGTCGC TCGAACCGCG CAAGGCGAGC CGCGTCAATG TCGGACTGCG TTTTTCATCA
GGGCGCCGCG TCAATTCCGA AGCCGTCATC TTGTTGGCCG ACAAAGACGC GCAGCCCTAC
CGCATTGTCG CCTGGCGTGA CGATTTCGAT GGAAGTTTCT AA
 
Protein sequence
MARASGESGF VIVAVLWILA ALATLASVYS FYASASAVAA RVSSDRLQAE ALVSSALELT 
ALRLLGRSDD DPRSLGEFKF RMGGAEILVS FRSEGGRIDL NAAPKELLAG LFKTLGAKPD
DADSFADRII GWRKKGEAGK QNKEADLYKD AGLSYAPRQT PFQNIAELRF VLGLPPDLVE
SCMAFVTVFN GLPQIDVFAA APEIVQSLPH LDADVAATIV ERRGSLDAKA ILSLLGQAKD
SVSLEPRKAS RVNVGLRFSS GRRVNSEAVI LLADKDAQPY RIVAWRDDFD GSF