Gene BBta_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_2617 
Symbol 
ID5155089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp2712963 
End bp2713907 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID640557516 
Productputative general secretion pathway protein K 
Protein accessionYP_001238670 
Protein GI148254085 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATGC GCTGGCTGCC AGAGCTCCCG ATCACGGAAC GTGATGATCG CGAAGGCGGC 
TTCGTCCTGG TGGCGGTGCT GTGGATCCTG ATCTCACTGG CCGGACTGGC AGGGGCACTG
TCGATGTATC TCGTCAGCTC GGCCCAGCGG CTGTCGCTCG ATGATGCGCG CCTGCGATCG
GCCGCTTTGG CTTCGGCAAG CCTGGAGCTT GCCGCCTACA AGCTCTCCCT CACGTCGAAA
TCACAACGGC CGTCCGCGGG GGCTTTTTCA TTCCGGCTCG ATCATGCGCA GGTGTCGGTC
GTCTTCCAGT CGGAAGCGTC CCGCCTCGAT CTCAATCACG CGTCGAAGCA GATGCTGGCC
AACCTCTTCG GGGAGCTCGG TGCGTCCTCC GACAAGGCCG GCGCGTATGC CGAGCGGATC
ATCGGCTGGC GGACCCCGCT GAGCGAGACC GCTTCGGATG GCGAGCGCGA CCTCTACCGG
ACAGCCGGCG TGGACTACAT GCCGCGCAGT GCGCCGTTCG CCAGCAGTGA GGAGCTCCGG
CTGGTGCTCG ATCTGCCGCC GGCGCTGGTC GACAAGGCGA TGCCCTTCGT GACCGTCTTC
AACGGCCGGC GCGAGATCGA TGCGCTGGAA GCTGCGCCCG AAGTGGTGGC CGCGCTGCCA
GGGATGACGG AGGATCTGTT GAAGAGCTTC CTCGCGCAGC GCGCTGGCCT GCGCCGTGAC
GCTCGATCGC TTGCCTCCGT ACTCGGACCG GCCCGGGCCG CGGCGACCTT GGACGTCGGT
GATGCGGTCC GGGTGTTGAT CACCATCGCC TTCGACGCCG GTCGCCGCTC CGCGGCCGAG
GCCGTGATCC TGCTCGGCGA GGGCGATGAT CCGTACCAGA TCCTGGCCTG GCGCGACGAT
GCGGGATATC CCGCCATGCT CAGGCCGTCA GGAAAGGCGC TGTGA
 
Protein sequence
MIMRWLPELP ITERDDREGG FVLVAVLWIL ISLAGLAGAL SMYLVSSAQR LSLDDARLRS 
AALASASLEL AAYKLSLTSK SQRPSAGAFS FRLDHAQVSV VFQSEASRLD LNHASKQMLA
NLFGELGASS DKAGAYAERI IGWRTPLSET ASDGERDLYR TAGVDYMPRS APFASSEELR
LVLDLPPALV DKAMPFVTVF NGRREIDALE AAPEVVAALP GMTEDLLKSF LAQRAGLRRD
ARSLASVLGP ARAAATLDVG DAVRVLITIA FDAGRRSAAE AVILLGEGDD PYQILAWRDD
AGYPAMLRPS GKAL