| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_0601 |
|---|
| Symbol | |
|---|
| ID | 8135916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 732946 |
|---|
| End bp | 733887 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644868218 |
|---|
| Product | General secretion pathway protein K |
|---|
| Protein accession | YP_003020433 |
|---|
| Protein GI | 253699244 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0000000025238 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGGG AAAAGGGGTT CGCCCTGGTG ATAACCCTGA TCGTCACGAC GCTCCTCGTG
GCGCTCCTGG TGGAGTTCGT GAACGAGGTC TACGTCGACA CCTCCCACAG CCACAACTTC
GTCGCCTCGC AGCAGGCGGG GATACTGGCG GAGTCGGGGG TAGCGGGGGG AATCAAGCTG
CTGCAGCTCT CCAACGCCAT GAGGCTGAAC GAGCCGTACA GCTCCCTTCT GGAACCGTGG
GCGAAGCCGC AATCTTTCCA GGCGGATGAC GGCACGGTGA CCATCACCAT CGAAGAGGAG
AGCGGGAAGC TTAACATCAA TACAGCCACC TCTGCCAACG GCACTGAGGC CCCCTATTAC
ACTCCGATGC TGCTCCGCCT CCTCACCAGG CTGAAGCTCG GCACCGACCT CGCCGACTCG
CTTATGGACT GGGTGGACGA AAACGAGAAT CCGCTCCCCG GGGGGGCCGA GAGCAACTAC
TACGGGAACC TGAAGCTCTC CTACGCAGCC AAGAACAAGA GACTGGAAAC GGTGGACGAA
CTCGCGCTGG TAAGGGGTTA CACGCCAGAG GCTCTGACAA CCCTGAGATC GCTGGTGACC
GTGTACGGCA ACAGCAACGA GTTGGAACCG GCCACTCTGA TAAACGTCAA CACGGCGCCC
AAAGAGGTGC TGGAGGCTCT GGACGAAAGG ATGAGCGAAG ACCTGGTGCA AAGGATCCTC
GACTTCCGCA AGACCAGGCC GATCAAGGGA ATGGCGGATT TCAATTCGAT AGCCGGAATT
GACTCGGTGC TGCCCAGGTT CGCGGACAAA ATAACCTTCG GCGGCAGCGT GTACCGGATC
CGCGCCGAGG GAAAAGTGGG AGAAAGCGTG GCCGTGGCCG AGGCCGTGGT CCGCACCAGT
GGTAGTGCGA CACCGGCAGT TCTTTATTGG AGAGAGTATT GA
|
|---|
| Protein sequence | MKGEKGFALV ITLIVTTLLV ALLVEFVNEV YVDTSHSHNF VASQQAGILA ESGVAGGIKL
LQLSNAMRLN EPYSSLLEPW AKPQSFQADD GTVTITIEEE SGKLNINTAT SANGTEAPYY
TPMLLRLLTR LKLGTDLADS LMDWVDENEN PLPGGAESNY YGNLKLSYAA KNKRLETVDE
LALVRGYTPE ALTTLRSLVT VYGNSNELEP ATLINVNTAP KEVLEALDER MSEDLVQRIL
DFRKTRPIKG MADFNSIAGI DSVLPRFADK ITFGGSVYRI RAEGKVGESV AVAEAVVRTS
GSATPAVLYW REY
|
|---|
| |