33 homologs were found in PanDaTox collection
for query gene Mkms_4050 on replicon NC_008705
Organism: Mycobacterium sp. KMS



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008146  Mmcs_3976  substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 276 aa  536  1e-151  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4050  substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 276 aa  536  1e-151  Mycobacterium sp. KMS  Bacteria  normal  0.537178  normal  1 
 
 
-
 
NC_009077  Mjls_3990  substrate-binding region of ABC-type glycine betaine transport system  100 
 
 		 276 aa  536  1e-151  Mycobacterium sp. JLS  Bacteria  normal  0.148982  normal  0.178954 
 
 
-
 
NC_008726  Mvan_4480  substrate-binding region of ABC-type glycine betaine transport system  60.71 
 
 		 273 aa  302  4.0000000000000003e-81  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.112455  normal  0.149319 
 
 
-
 
NC_009338  Mflv_2215  substrate-binding region of ABC-type glycine betaine transport system  61.86 
 
 		 241 aa  295  5e-79  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.356157 
 
 
-
 
NC_009565  TBFG_11270  lipoprotein lpqZ  58.89 
 
 		 286 aa  270  2.9999999999999997e-71  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000341327  hitchhiker  0.00148817 
 
 
-
 
NC_013235  Namu_1403  Substrate-binding region of ABC-type glycine betaine transport system  32.33 
 
 		 324 aa  92  8e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  0.619701  normal  0.504767 
 
 
-
 
NC_008541  Arth_2839  substrate-binding region of ABC-type glycine betaine transport system  29.93 
 
 		 318 aa  90.5  2e-17  Arthrobacter sp. FB24  Bacteria  normal  0.0104087  n/a   
 
 
-
 
NC_013169  Ksed_26230  periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)  28.94 
 
 		 300 aa  88.6  1e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2554  Substrate-binding region of ABC-type glycine betaine transport system  30.4 
 
 		 320 aa  83.6  0.000000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000921458 
 
 
-
 
NC_013441  Gbro_1878  Substrate-binding region of ABC-type glycine betaine transport system  32.2 
 
 		 338 aa  83.2  0.000000000000005  Gordonia bronchialis DSM 43247  Bacteria  normal  0.200782  n/a   
 
 
-
 
NC_014158  Tpau_1208  Substrate-binding region of ABC-type glycine betaine transport system  34.31 
 
 		 299 aa  82  0.00000000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0243726  n/a   
 
 
-
 
NC_014210  Ndas_0400  Substrate-binding region of ABC-type glycine betaine transport system  28.73 
 
 		 300 aa  76.3  0.0000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5601  substrate-binding region of ABC-type glycine betaine transport system  29.78 
 
 		 316 aa  76.3  0.0000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_1207  substrate-binding region of ABC-type glycine betaine transport system  29.78 
 
 		 316 aa  75.9  0.0000000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_8178  ABC transporter substrate binding protein (proline/glycine/betaine)  27.63 
 
 		 304 aa  71.6  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6268  Substrate-binding region of ABC-type glycine betaine transport system  28.73 
 
 		 294 aa  71.6  0.00000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013174  Jden_2261  Substrate-binding region of ABC-type glycine betaine transport system  27.92 
 
 		 306 aa  70.5  0.00000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.989377  normal  0.378374 
 
 
-
 
NC_013421  Pecwa_4556  Substrate-binding region of ABC-type glycine betaine transport system  28.23 
 
 		 293 aa  70.1  0.00000000004  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_5348  substrate-binding region of ABC-type glycine betaine transport system  29.24 
 
 		 314 aa  69.7  0.00000000005  Mycobacterium sp. JLS  Bacteria  normal  0.684846  normal  1 
 
 
-
 
NC_008146  Mmcs_4967  substrate-binding region of ABC-type glycine betaine transport system  29.24 
 
 		 314 aa  69.3  0.00000000007  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_5055  substrate-binding region of ABC-type glycine betaine transport system  29.24 
 
 		 314 aa  69.3  0.00000000007  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011989  Avi_0504  ABC transporter substrate binding protein (proline/glycine/betaine)  28.99 
 
 		 304 aa  66.6  0.0000000004  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_3633  Substrate-binding region of ABC-type glycine betaine transport system  27.68 
 
 		 303 aa  59.7  0.00000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.669788  n/a   
 
 
-
 
NC_009565  TBFG_13791  osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport system substrate binding lipoprotein proX  28 
 
 		 315 aa  57.4  0.0000003  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.643874 
 
 
-
 
NC_011830  Dhaf_2802  Substrate-binding region of ABC-type glycine betaine transport system  23.79 
 
 		 317 aa  55.1  0.000001  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000741743  n/a   
 
 
-
 
NC_013172  Bfae_30010  periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)  27.85 
 
 		 315 aa  53.1  0.000005  Brachybacterium faecium DSM 4810  Bacteria  normal  0.107926  n/a   
 
 
-
 
NC_013131  Caci_3084  Substrate-binding region of ABC-type glycine betaine transport system  28.36 
 
 		 302 aa  48.9  0.00009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.503055  normal  0.205604 
 
 
-
 
NC_009664  Krad_1293  Substrate-binding region of ABC-type glycine betaine transport system  27.09 
 
 		 311 aa  48.9  0.0001  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_0156  substrate-binding region of ABC-type glycine betaine transport system  27.89 
 
 		 344 aa  47.8  0.0002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0633468 
 
 
-
 
NC_009513  Lreu_0184  substrate-binding region of ABC-type glycine betaine transport system  21.55 
 
 		 299 aa  45.1  0.001  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1338  Substrate-binding region of ABC-type glycine betaine transport system  33.09 
 
 		 337 aa  43.9  0.003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.591511  hitchhiker  0.000311431 
 
 
-
 
NC_007005  Psyr_4251  substrate-binding region of ABC-type glycine betaine transport system  31.43 
 
 		 297 aa  42.4  0.007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>