| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6268 |
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| Symbol | |
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| ID | 8330479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7356599 |
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| End bp | 7357483 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644946699 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003103918 |
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| Protein GI | 256380258 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA CGTTGACGGC GGTGGCGGCG GTGGTCGCGC TGGCGACCGC CGGTTGCGGC
TCGGCGGAGG ACCTCAGCGG GAGCGGCGAC CAGGCCGCCT CCGGCGAGAT CGTGGTCGGC
TCGGCCGACT TCACCGAGAA CAAGATCCTG GCCGAGATCT ACGCCGGCGC GCTCAAGACC
ACCGGCGCGA AGGTGTCGGT GCGCTCCGGC ATCGGCGCGC GCGAGCTGGT CGTGCAGGCG
CTGCAGGACA AGTCGCTCGC GGTGGTGCCC GAGTACACCG GCAACCTGCT GGTGCACTTC
GACAAGGCCA GCACCGCCTC CGAGGCCGAG GAGGTCTACT CGGCGCTCGA GTCCAAGCTC
CCCGAGGGCC TGGAGGTGCT GGAGAAGTCG GCGGCCGAGG ACAAGGACGT CCTGGTGGTC
ACCAAGGAGA CCGCCGACTC GGGCGTGAAG TCCATCGCCG ACCTCGGCGA GGGCAAGTAC
GTGCTCGGCG CGGCGGGCGA GTGGGCCCAG CGCTGGGAGG CCAAGATCAA GGAGCTGTAC
GGGGTCACCT TCAAGGAGAT CAAGACCACC GACGCGGGCG GCCCGGTCAC CGTGGACACG
CTCAAGGACG GCGGGTCGCA GGTCGCGAAC CTGTACACCA CGCAGGCCGA CATCGCGGTG
AACGGGTTCG TGCAGCTGGA GGACCCGAAG AGCATGTACC CGGCGCAGAA CATCCTGCCG
CTGCTGCGGA CCGGCGCCGT GGACGACAAG GGCAAGGCCG TGCTGGACAA GGTCTCCGCC
GCGCTGACGA CGGAGAACGT GGCCGAGCTG GTCAAGAAGG TCGACGTGGA CAAGGAGACC
GTGGCCAACG TGGCGGCGGA GTTCCTGAAG ACGGTGTCCC TGTAA
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| Protein sequence | MKRTLTAVAA VVALATAGCG SAEDLSGSGD QAASGEIVVG SADFTENKIL AEIYAGALKT
TGAKVSVRSG IGARELVVQA LQDKSLAVVP EYTGNLLVHF DKASTASEAE EVYSALESKL
PEGLEVLEKS AAEDKDVLVV TKETADSGVK SIADLGEGKY VLGAAGEWAQ RWEAKIKELY
GVTFKEIKTT DAGGPVTVDT LKDGGSQVAN LYTTQADIAV NGFVQLEDPK SMYPAQNILP
LLRTGAVDDK GKAVLDKVSA ALTTENVAEL VKKVDVDKET VANVAAEFLK TVSL
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