Gene Bfae_30010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_30010 
Symbol 
ID8401545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp3395719 
End bp3396666 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content71% 
IMG OID644999033 
Productperiplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
Protein accessionYP_003156352 
Protein GI257070097 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.107926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCC ACAGCACCCG CCGCCACCTG CTCGGAGCGC TCGGGGTCGG AGGCATCGCC 
CTCGGCGCCG CGGCCTGCGG CAGCTCCGAC CCCTTCGACG AGGACGGCGG CGACTCCGGC 
GGCAGCGGCT CCGACGGCGG TTCCGGCTCC GGCACCCTCG CCGTCGGCTC CCAGGCCTAC 
TACTCCAACG AGATCGTCGC CGAGCTGTTC GCGCAGGTGC TCGAGGCCGA GGGCTTCACC 
GTGGACCGCC AGTTCCAGAT CGGCCAGCGC GAGGTGTACA TGCCGGAGCT CGAGGCCGGC 
TCGCTGGACG TGCTGCCCGA ATACCTCGGC AACCTCCTGC AGCACTACGA CTCCGAGGCC 
GGGACCGCGA GCCCCGAGGA GATCCACGCC GCGCTCGGCG AGGCGCTGCC CGAGGGGCTG 
CGCGTGCTCT CCTTCGCCGA GGCCTCCGAC CAGGACTCCT ACACCACCAC CTCGGACTTC 
GCGAGCGCCC ACTCCCTGGC CGCCATCGGC GACCTCGCCG GCGTGGAGGA GGATCTGAAG 
ATCGCGGCGA ACAGCGAGTT CGACGTGCGC CCCTACGGGC CCGACGGGGT CGAGAGCGTC 
TACGGGGTCG ACGTCACCGT GGTGCCGGTG GAGGATTCCG GCGGCCCGCT CACCGTGCAG 
GCCCTGCTCG ACGGCGACGT GCAGCTCGCG GACATCTACA CCGCGGACCC GGCCATCGCC 
GAGAACGATC TCGTGGTGCT CGAGGACCCG GAGTCCATGA TCCTGCCGCA GAACGTGGTC 
CCGGTGGTCT CCGAGAAGGT CGACGACGCC GCCGCCGAGG CGATCGACGC CGTCCTCGCC 
CAGCTCAGCG CCGATGACCT CGTGGAGCTG AACCGGCAGA GCGTCGTGGA CCAGGCCTCC 
TCCGCGGAGA TCGCCACGGG CTGGCTCACG GAGAAGGGCC TGGTCTGA
 
Protein sequence
MTIHSTRRHL LGALGVGGIA LGAAACGSSD PFDEDGGDSG GSGSDGGSGS GTLAVGSQAY 
YSNEIVAELF AQVLEAEGFT VDRQFQIGQR EVYMPELEAG SLDVLPEYLG NLLQHYDSEA 
GTASPEEIHA ALGEALPEGL RVLSFAEASD QDSYTTTSDF ASAHSLAAIG DLAGVEEDLK 
IAANSEFDVR PYGPDGVESV YGVDVTVVPV EDSGGPLTVQ ALLDGDVQLA DIYTADPAIA 
ENDLVVLEDP ESMILPQNVV PVVSEKVDDA AAEAIDAVLA QLSADDLVEL NRQSVVDQAS 
SAEIATGWLT EKGLV