| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_3990 |
|---|
| Symbol | |
|---|
| ID | 4879699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4222714 |
|---|
| End bp | 4223544 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640141302 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_001072256 |
|---|
| Protein GI | 126436565 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.148982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.178954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGCC TGCTGATCGC GTTGTGCGCA GTGGCGCTGA CCGCGTGCGG TGCTCCGCAG
GCCGGACCGT CCCTGACGAT CGGCTCCGCG CAGGACGACG CGTCGTTGGT CACCGCACAT
CTGTATGCCG CGGCGCTGCG CCACTACGGC ACCGGCACCC GGGTGGAGCC GACCGCCGAT
CCGCTGGCCG CGCTCGACGC CGGTGAGGTC GCCGTGGTGC CGGGCCTCAC CGGTCGGCTG
CTGGACCGTT TCCAGCCCGA GGCGACCGCG CGCGCCGACG AGCAGGTGTA CCGGGACATG
GTCTCGGCGC TGCCGGAGGG CATCGCCGCC GGCGACTACA CCACGGCCGC CGAGGACAAG
CCGGCCCTGG CCGTCACCGA GTCCACCGTC GCCGAACTCG GTGGTCAGGA CCTCCTGGCC
GTGGTGCGCA ACTGCGGTGA GGTCCGCCCG GGCCGGGTCC GCGGGGCGCG CACGCCAGCG
ACGATCGGCA CCTGCCGGCT GCCCGCCCCC CGCGACTTCC CGGACGCCGC GGCGCTGGTC
GCCGCCGTCA AGACCGGACA GGTCGACGCC GCATGGACGA CGACCGCGTC GCCGGGTATC
CCGCCGGACC TGGTGGTGCT CGCCGACAGC ACCTCGCTGG TGCGCGCCGA GAACGTCGTA
CCGCTGTACC GGCGCAACAC CCTCGGCGAA TCGCAGGTGC TCGCGCTCAA CGAGGTCGCC
GGCGTGCTCG ACACGGCGGC GCTGGCCGAC ATGCGCGCCC GGGTCCGTGC CGGGGACGAT
CCCGCGGTGG TCGCCGGCGA GTGGCTGGCG GAGCACCCGC TGCGGGACTG A
|
|---|
| Protein sequence | MRRLLIALCA VALTACGAPQ AGPSLTIGSA QDDASLVTAH LYAAALRHYG TGTRVEPTAD
PLAALDAGEV AVVPGLTGRL LDRFQPEATA RADEQVYRDM VSALPEGIAA GDYTTAAEDK
PALAVTESTV AELGGQDLLA VVRNCGEVRP GRVRGARTPA TIGTCRLPAP RDFPDAAALV
AAVKTGQVDA AWTTTASPGI PPDLVVLADS TSLVRAENVV PLYRRNTLGE SQVLALNEVA
GVLDTAALAD MRARVRAGDD PAVVAGEWLA EHPLRD
|
|---|
| |