Gene Lreu_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0184 
Symbol 
ID5190128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp217613 
End bp218512 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content37% 
IMG OID640589979 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001270791 
Protein GI148543421 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTA AGAAAATCGT TGCTCTTTCA TTATTAAGCA TTGCTGGGTT GCTAGCAGGA 
ACTATTACGC CGGCAGTAGC AAGTGCTGCC AGCAATAAAC CAATTATTGT GGGTTCAAAA 
AATGTTTCAG AAAGTAAGAC TGTCAGTGAA ATTTACGCGC TTGCACTTGA ACATGAGGGT 
TATAAGGTTA CTCGGAAACC CAATATTTCA AATAATGTGA TTTTTAGTGC AACACAAAAA 
GGCGAAGTTG ATGTTTATCC TGATTATACG GGAACAATTG TAGAGGCGTA CCTTAAAAAG 
AAGGGGACCG GCAAGAGTGC TAGTCAAATG GCTAAATTAG CACACGATGG TATTCAAAAA 
GACGGTTTGA CGACATTTAA ATACGCCCCG GGTGATAATC GCCAAGGTGT TGCAATGCCA 
ACTAAGGACG CAAAGAAGTA CCACATTACC AATTTAAGTG AACTGCAAAA GAATGCAAAG 
AAGATTAACT TTGCTTCACA GGGTGAGTTC GAAAAACGTG CTGATGCCCT TCCGGAAATG 
AATAAGGTTT ATGGTAAATT TGATTTTAAG TCAATTAAGG ATTATGACGT AAATTTACTC 
TACAAGATTA TGGAACAAGG GAAAGCACAA GCAGCTCCGG TTTCAACAAC TGATGGTCAA 
TTAGCAACTG GCAAGTTTAC TTTACTAAAG GATAATAAGA ATATTTGGCC ACCATATAAT 
TTAGTGCCAG TAGTAAATAA AAAAGCTGCT AAAAGTCATC CAAAAATGGA GCAAGCCTTA 
AATAAAGTTG ATGCGAAGTT AACAACTAAG CAATTAACAG ATCTAAACAA AAAAGTTAAT 
GTCGACGGGC AAAATTATAA GACTGTTGCT AAAAATTGGT ATAATCAAAA TATGAAATAA
 
Protein sequence
MRFKKIVALS LLSIAGLLAG TITPAVASAA SNKPIIVGSK NVSESKTVSE IYALALEHEG 
YKVTRKPNIS NNVIFSATQK GEVDVYPDYT GTIVEAYLKK KGTGKSASQM AKLAHDGIQK 
DGLTTFKYAP GDNRQGVAMP TKDAKKYHIT NLSELQKNAK KINFASQGEF EKRADALPEM 
NKVYGKFDFK SIKDYDVNLL YKIMEQGKAQ AAPVSTTDGQ LATGKFTLLK DNKNIWPPYN 
LVPVVNKKAA KSHPKMEQAL NKVDAKLTTK QLTDLNKKVN VDGQNYKTVA KNWYNQNMK