| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1338 |
|---|
| Symbol | |
|---|
| ID | 9145220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 1484860 |
|---|
| End bp | 1485873 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_003636435 |
|---|
| Protein GI | 296129185 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.591511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000311431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCA GCACGCGCAC CCGCTCGCTC GGCGTCCTCG CCGCCGTGGT GCTCACCCTC
GGGGCGTGCG GCACGCCCGG CTCGGGCGGT GGCCAGGCCG AGACCGAGCC GACGAGCGCC
GCGGGCGGAC CGCCCGCGTG CGCGCCGGTC GCGGGCGAGA CGCTCGTGGT GCTCGAGGAC
GACAAGGGCC TGCAGAACGC CGACAACGTG CTCCCCGCCG TCAACGCGCA GGTCGCGGCA
GAGCACCCGA CGGTGCTCGA GCTCCTCGAC GCCGTGTCGG CCGCGCTCGA CACCGACCGG
CTCATCGAGC TCAACCGCGC GGTCGACGTC GAGCGCAGGA CGTCGGCCGA GGTCGCGCAG
GATTTCGTGG CCGAGAAGTC GCTCGCCGCG ACGGACGCGA CGGCCGGTGC GGGCACGACC
CTGACCGTCG GCGCCGCCAA CTTCTCCGAG AGCATCACGC TCGCCGAGAT CTACGCCGCC
GTGCTGCGCA GCGCGGGCTT CGCTACCGAG GCCCGGACGA TCGGCGCGAG AGAGACGTAC
CTGCCCGCGC TGCAGTCCGG CGAGGTCGCG GTCGTCCCCG AGTACGCCGC GACCCTCGCG
ACGTTCCTCA ACGGCCAGGT CAACGGTGCG GACGCGCCGC CGGTGGCGTC GAGCGACGTC
GACGAGACCG TGGCCGCGCT CACACCGCTG GCGGCGGAGT CGGGCCTGGT CGTGGGCGCC
CCGTCGGAGG CGCAGGACCA GAACGCGTTC GCCGTGACGG CGGAGTTCGC GGCCGAGCAC
GGTCTCGAGA CGCTGTCGGA CCTCGCCGCG AGCTGCGGTG GCGTCGTGCT CGCGGGGCCG
CCGGAGTGCC CCGAGCGACC GTTCTGCCAG ATCGGTCTCG AGGAGACGTA CGGACTGTCC
GTCGGCGAGT TCAAGTCCTA CGACTTCGCG CTCATCGGGC AGGCCGTGCG CCAGGGTGAC
GCCGCCGTGG GCCTCGTGAC GTCGTCGGAC GGGTCGCTCG CGCCGCGGGG CTGA
|
|---|
| Protein sequence | MRTSTRTRSL GVLAAVVLTL GACGTPGSGG GQAETEPTSA AGGPPACAPV AGETLVVLED
DKGLQNADNV LPAVNAQVAA EHPTVLELLD AVSAALDTDR LIELNRAVDV ERRTSAEVAQ
DFVAEKSLAA TDATAGAGTT LTVGAANFSE SITLAEIYAA VLRSAGFATE ARTIGARETY
LPALQSGEVA VVPEYAATLA TFLNGQVNGA DAPPVASSDV DETVAALTPL AAESGLVVGA
PSEAQDQNAF AVTAEFAAEH GLETLSDLAA SCGGVVLAGP PECPERPFCQ IGLEETYGLS
VGEFKSYDFA LIGQAVRQGD AAVGLVTSSD GSLAPRG
|
|---|
| |