Gene Dhaf_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2802 
Symbol 
ID7259809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3010470 
End bp3011423 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content46% 
IMG OID643562720 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002459262 
Protein GI219668827 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000741743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACACTT CGCAAACTAC CGAAGAGTAT GAAGAGAAAG GAAAGGTGAC TATGATGATG 
AAAAAGAACC TTATGATGTG GAGTTTGGTT GGTGTGTTGA TGCTTGCTTT AGTGGGCTGC 
AGCAGCAGTG CGGCAAAGAG TGGCGAAAGC ATCACAGTCG GCTCGAAAAA CTTTACGGAG 
AACATTATTA TTGCTCATAT GATGGCTGAC CTGGTGGAAG CACATACGGA TCTAACCGTG 
GACAGAAAAG TTAATCTTGG CGGCTCCAAT GTAGCCTGGA CGGCTTTGGA GAACAATGAC 
ATCCAGATGT ACCCTGATTA CACCGGAACT ATTGTAGCCA ACTATTATCA GGAAGCAACC 
GGAACATCGG AGGAAACTAT GGCCAAAACC TTGGAGTTAA CGGCTGAAGA TAATCTAAAG 
GCTTTGGGGT CGCTGGGTTT CAACAATACT TATACTCTGG CAGTGACTAA AGAGACAGCG 
CAAAAATATA ATCTGAAAAC CTACAGCGAT TTGGTTGGAG TATCGGAACA GTTGGTTCTG 
GGCTGTGAAT TTGAATTCAA AGATCGGCCG GATGGCTACC CGGGGCTTCA AGACACATAC 
AATATGAACT TCAAGGAAGT CAAAGGTATG GACCATGGCA TCATGTTCCG CTCTCTGGTC 
GAGGGTGAGG TTGATGTGGT CGATGCTTAT GCCACCGACG GCCAGATTAA AGTCTTCGAT 
TTGGTCATTT TGGAGGACGA CCGGGAATTC TTTCCACCCT ATGATTGTCT GCCTTTAGTT 
CGCCAGGACA CCCTTGACCA ATACCCGGAA CTGGAAGAGA TTCTGAATAA ACTTGCCGGA 
CAAATCAACG AGGCGGACAT GCAAGAACTA AATGCTAAAG TGGATGACCA GGGCATGAAA 
GAAGATGTTG TCGCTCATGA CTTTCTGGTA TCCGCAGGGT TAATAAAGGA ATAA
 
Protein sequence
MDTSQTTEEY EEKGKVTMMM KKNLMMWSLV GVLMLALVGC SSSAAKSGES ITVGSKNFTE 
NIIIAHMMAD LVEAHTDLTV DRKVNLGGSN VAWTALENND IQMYPDYTGT IVANYYQEAT 
GTSEETMAKT LELTAEDNLK ALGSLGFNNT YTLAVTKETA QKYNLKTYSD LVGVSEQLVL 
GCEFEFKDRP DGYPGLQDTY NMNFKEVKGM DHGIMFRSLV EGEVDVVDAY ATDGQIKVFD 
LVILEDDREF FPPYDCLPLV RQDTLDQYPE LEEILNKLAG QINEADMQEL NAKVDDQGMK 
EDVVAHDFLV SAGLIKE