| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0156 |
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| Symbol | |
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| ID | 5668581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 186804 |
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| End bp | 187838 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641239085 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001504529 |
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| Protein GI | 158312021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0633468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTCGG CGAACGTGAG CGAACCAACG TCGGTGGCGG CAGAGGCTGG GCAGGCCGTG
CACCGGCGCA CCCGGCGCAC CCGACGGATC CGCCCGTGCC CGCGCCGTGC CGGCCGGCGC
CGGGTGGGCG CCGCGGCGGC GGCCATGCTA GCTCTCGCGC TGACCACTGC GGCCTGCGGC
GACGGCTCCG GCGGCGCCAG CCTTGGTTCG CTCACCGTCG CCGACGCCGG TTTCACCGAG
AGCAAGATCC TCGCCGACAT GTACGGCGAA CTGCTCACCA ACGCCGGCTA CAAGGTCGAG
CGGACCTCGG TGCAGAGCAC CGAGATCGCC CAGTCCTCCC TGGAGAGCGG GCAGATCGAC
GCCATGCCGC AGTATGTGGC GACCTACGCC GACCTGCTGA ACTCCCAGGT CAACGGCTCC
GGAGCCACCT CGGTCTCGTC GTCGGACCTG AACGCGTCGC TGGCCGGACT GCGCCGCCTC
GCGAAGGGGC TGGGCCTGAG CGTGCTCGAG CCGGCCGACG CGGTCGACCA GAATGCCTTC
GCGGTGAGCA GGTCCTTTGC CGCGGAGCAC CACCTGACGA CCCTGACCGA CCTGGGTGCC
AGTGGCCTGA CGGTGAAGCT CGCTGCGGGC GCCGAGTGCG CGACCCGCCC GTTCTGCCAG
CCCGGGTTGG AGAAGACCTA CGGGATCAAG ATCTCCGAGA TCGTCGAAAC CGGTGTGGCG
ACCGCCCAGA CCAAGGCCGC GGTACGGGAC AACACCGCGC AGCTCGGCCT GGTGCTCACC
ACCGACGCCA CCGTCAACGG CTACAACCTG GTCGTGCTGA CCGACGACAA GAAGCTCCAG
AACGCCGACA ATCTGGTGCC GATCGTGAAC ACCGACTCGC TCGCCCCGGA GATCACCTCG
GCACTGAACG CGCTGGCGCC GGTGCTCACG ACGGCGGACC TGGCCGAGCT GAACAAGAGG
GTGGACGCGG AGCGGGAGAA GTCCGAGGAG GTCGCGCACG ACTTCCTGGC CGAGAAGGGC
CTGCTGGACA GCTGA
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| Protein sequence | MGSANVSEPT SVAAEAGQAV HRRTRRTRRI RPCPRRAGRR RVGAAAAAML ALALTTAACG
DGSGGASLGS LTVADAGFTE SKILADMYGE LLTNAGYKVE RTSVQSTEIA QSSLESGQID
AMPQYVATYA DLLNSQVNGS GATSVSSSDL NASLAGLRRL AKGLGLSVLE PADAVDQNAF
AVSRSFAAEH HLTTLTDLGA SGLTVKLAAG AECATRPFCQ PGLEKTYGIK ISEIVETGVA
TAQTKAAVRD NTAQLGLVLT TDATVNGYNL VVLTDDKKLQ NADNLVPIVN TDSLAPEITS
ALNALAPVLT TADLAELNKR VDAEREKSEE VAHDFLAEKG LLDS
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