| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3084 |
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| Symbol | |
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| ID | 8334436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3388269 |
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| End bp | 3389177 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956231 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003113834 |
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| Protein GI | 256392270 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.503055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.205604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAGT CCCCCCGCAC CCTGCTGTCC ACGGCCGCCG TCGCGCTGGC CGCACTGGCC
GCCACCGCCT GCACCAGCGG CAACCCCCTG GTACCGGGCC CGAAGAAGGG CCAGGTGACG
GTCGGCTCGG CCAACTTCCC GGAGAACGTC CTGCTCGCCG ACATCTACGC CTCAGCGCTG
AAAGCCAAGG GCGTGAAGGT CGGCATCCGC TTCAACGTCG GCAGCCGCGA AGTGCTGTAC
CAGCAGGTCC AGCAAGGCTC GCTGACAGTA CTGCCGGAGT ACAACGGCGC ACTGCTGGCC
TATCTGGACT CCAAGACCCG CGCCGCCACC ACCGCCGAGA TCGACGCCCA ACTCCGCGCA
ACCCTGCCGG CAAAGCTGGA GATCCTGGAC CCCTCCCCCG CCGAGGACAA GAACGCCCTG
GTCGTCACCG CCGCAACCGC CGCAAAGGAC CACCTGACCG CGATCGGCGA CCTGGCACCC
TACGCAGCCG CCCTGAGCAT CGGCGGACCC CCAGAGTTCA AAGAGCGCTA CCAGGGCCTC
CCAGGCCTGA AGGACAAATA CGGCCTGACG TTCAAGAGCT TCGCCTCCCT GGACACCGCC
GGCCCCATCA CCGTCAAAGC CCTCGCCGAC GACTCAGTCC AGGTCGCGAC CCTGTTCACC
ACCGACCCCA ACATCGTCTC CCACAACTTC AAAGTCCTGA CCGACCCCCA ACAAGTCTTC
ACCGCCCAGA ACGTGACCCC CCTGGCCTAC CGCGCCAGCA TGACCCCCAC CGCCACCGCC
ACCCTGAACG AGGTCTCAGC CAAGCTGAAC ACCGCAGCCC TGGTCGGCAT GATGGCCCAG
ATCATGAACC AGAAGCGCGA CATCGACGTG GTCGCCGACA ACTGGCTGAA GGGCGCCGGG
CTGCGGTAG
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| Protein sequence | MSKSPRTLLS TAAVALAALA ATACTSGNPL VPGPKKGQVT VGSANFPENV LLADIYASAL
KAKGVKVGIR FNVGSREVLY QQVQQGSLTV LPEYNGALLA YLDSKTRAAT TAEIDAQLRA
TLPAKLEILD PSPAEDKNAL VVTAATAAKD HLTAIGDLAP YAAALSIGGP PEFKERYQGL
PGLKDKYGLT FKSFASLDTA GPITVKALAD DSVQVATLFT TDPNIVSHNF KVLTDPQQVF
TAQNVTPLAY RASMTPTATA TLNEVSAKLN TAALVGMMAQ IMNQKRDIDV VADNWLKGAG
LR
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