11 homologs were found in PanDaTox collection
for query gene Hneap_1188 on replicon NC_013422
Organism: Halothiobacillus neapolitanus c2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013422  Hneap_1188  CHAD domain containing protein  100 
 
 
313 aa  641    Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00821021  n/a   
 
 
-
 
NC_011901  Tgr7_3177  hypothetical protein  32.54 
 
 
364 aa  64.7  0.000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0977  hypothetical protein  32.08 
 
 
517 aa  56.6  0.0000006  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4676  CHAD domain-containing protein  27.01 
 
 
521 aa  53.1  0.000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0879  hypothetical protein  27.31 
 
 
305 aa  49.3  0.00007  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000225039 
 
 
-
 
NC_011060  Ppha_1698  CHAD domain containing protein  29.96 
 
 
523 aa  49.3  0.00008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.94723  n/a   
 
 
-
 
NC_007005  Psyr_2056  CHAD  26.2 
 
 
253 aa  45.4  0.001  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.000461934  normal  0.477312 
 
 
-
 
NC_008463  PA14_13200  hypothetical protein  29.19 
 
 
258 aa  43.9  0.003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.580154  normal 
 
 
-
 
NC_004578  PSPTO_2251  hypothetical protein  25.67 
 
 
253 aa  43.5  0.005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.624022  n/a   
 
 
-
 
NC_010803  Clim_1269  CHAD domain containing protein  25.33 
 
 
555 aa  43.5  0.005  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2560  hypothetical protein  32.69 
 
 
296 aa  42.4  0.01  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
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