| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1188 |
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| Symbol | |
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| ID | 8534341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1294461 |
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| End bp | 1295402 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646383578 |
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| Product | CHAD domain containing protein |
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| Protein accession | YP_003263071 |
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| Protein GI | 261855788 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5607] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00821021 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAC GAATTAAACA CATCAAGCAA CTACACAAAC CAGCAGACCG AGTCGCACGG
GTTATCGTCC GAAATATTAG AAAAAACATG CTAAAGGCCC GTCGAATATG GCTAAATCAA
GCTGCTAACC CAAGCGGCGA CCAACAAGAC AGCGAAGCCT TGCATAATTT CCGTGTAGAA
ATACGTCGAT TGCGTGTCTG GTTACAGCAA ACCCGTGACC TGATACGAAA TAAAACAAAA
GCACGTATGC AATTGAAAAA CTGGGCACAG GGCAGCAATG CTGGCCGTGA CTTGGAAGTA
ATGCTCGGCT TATTGCAGCA GGCAAACACA GAAATCGACC ACGGTTTACC CAGCATCCCA
TTGGTGCAAG ACAGTACAAA ACTAGAGGAA CTCTTTTCTC AGCACCCACT GACACTCAAG
CCCAGAACAC GAATTTCTGT TCAAAGAGAG GGAAAAGCCT CATTTGCGAA CTGGCTTGCG
GATCGCCTGA GCATCGAACT TGAAAAGACA CTGCCGCTAT TCAAGGACGA GGACGAAACT
TTGCATAAAG CCAGAATTCA CATCAAGCAC ATGCGTTATC TCATTGAACC AATTGCGTCT
TTAAGGCACG TTGCTACCCA TCCCGCATTA ACCCAACTCA AAGCCATGCA AACCAGGCTG
GGCAATCTGC ACGATTTGTT CGTGCTTCGT CAAAGGCTTT CGGATGTGTT GTGCGATCAG
CTCAATGAGC GTTTATCCGA TCTCATCAAG CGGCCCGGTA TCCCAACGCG GGGTATTCAA
GAGGCGTTAA GCGCGACCCG AAAGCAATTC ACGGTCTGTC TTGGGTGGCA AGCAAACCAA
TATGAGGCGG CGATGAACGA CTGGCACTCA TCTTCGCAAC AAACCTGCCG CCAAATGGAA
AACGCACTGA ATAGTCTGAT CAATGAACTA AGAAACGCCT GA
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| Protein sequence | MSQRIKHIKQ LHKPADRVAR VIVRNIRKNM LKARRIWLNQ AANPSGDQQD SEALHNFRVE
IRRLRVWLQQ TRDLIRNKTK ARMQLKNWAQ GSNAGRDLEV MLGLLQQANT EIDHGLPSIP
LVQDSTKLEE LFSQHPLTLK PRTRISVQRE GKASFANWLA DRLSIELEKT LPLFKDEDET
LHKARIHIKH MRYLIEPIAS LRHVATHPAL TQLKAMQTRL GNLHDLFVLR QRLSDVLCDQ
LNERLSDLIK RPGIPTRGIQ EALSATRKQF TVCLGWQANQ YEAAMNDWHS SSQQTCRQME
NALNSLINEL RNA
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