Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1269 |
Symbol | |
ID | 6355370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1371062 |
End bp | 1372729 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642668885 |
Product | CHAD domain containing protein |
Protein accession | YP_001943315 |
Protein GI | 189346786 |
COG category | [S] Function unknown |
COG ID | [COG5607] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGCC AAAGTGCGAG GCGAGCGAAG TCCGGAATAA TCGGGACAAG GCAGCATTTT GAGCGAAATA ATTTTACAGT GGTGCCCATA ATTGCGAAGA AGATGGCGGC TGTTCTGAAT ACCATATGCT TCAAATCTCC CGAAGGAATC GGTACACCGT CTCTTTCGGG ACTGTTTCAG CCCCATCTGA ATCTTCAGGA AGAGCTGCAC AGAAAGGAAA GGCGGAGCTA TTACGATACT TTTGAATGGC GCTGTTTCGA ACACCAAACG GCCGTTGTCG TTAAAAACCG AACAATTTCG CTGCTTGACC TTCAGAGCGG CGTTGAGAGC GCCCCACTCT CTTTAAAGAC TTCCCCATCC CATTTTCTGC CGTCGATTCT TCCGCCAGGT ACAATCAGAA ACAGACTCGA GTCCCTTGCC GGTCTCAGAG CGCTCATGAA AAGGTGCACC ATCGAGAGCG ACATGGTAGC TTTCAGAATT CTTGACCGGA TTGAAAAAAC AACAGGATTT CTTTTCGCTG AAACATTATT TCTTATCAAG GGAACACGCA AGGAACGGAT TTCAGGCTTG ATCACACTGA AGCCGCTGAA AGGGTTTCAT GATGATATTT TCATAATATC CCGCGCGCTC GAAGAGCATT TCGGTACGGA GAACCGACTC GACGTCAAGA GCGTTTTCAG ACTGCTGATG GACTCGGCAG GTTTGCGGGT CAACGATTAC AACCCGAAAA TTAATCTTTC GCTTCGTCCC GGCAATCCGG TCAGAATTTC AGCCGCCGAA CTGCTGCTGT TTACGCATGG CATCATGAAA TGCAATGAAC CGGGCATTCT TGGCAATATC GACACCGAGT TTCTGCATGA TTACCGGGTA GCGCTGAGGA GAACCCGTTC CCTGCTCAGC CAGATCAAAG GTATTTTTCC CCCGGAAATA ATCCTTCGCT ATCGTCAGGC ATTCAGCGAT ATCGGCAAAA AATGCAATAC GCTCAGGGAT TGCGACGTTT ATATGCTGAA ACAAACAGCT TACTTCGACA CTCTGCCACC ATTGCTTGCC GTTCACCTGT CTCCGTTTTT CGGGGAACTC GAAGCAACCC GAAAAGTCGA ACTGAAGCGA TTCAGCGACT TTCTGCGCTC AAAAACCTAC CGCACGATGC TCGATGAATG GCAATTGCTT CTAAAGGATG TTCTCAGTGC TCCCGGTACT GAGCGAGAAT CCGATCCCGG TCAGGAAGAA AGCATAAGCG TTGCAGTAAA AACCATTGGG AAAGCCTGGA AAAAAGTCAT CCGCCATGGC AGAGCCATAC CTGCTGAGGC TTCCGACAGC GAACTGCACG CGCTCAGGAT AGACTGCAAA AAGCTGCGTT ATCTTCTCGA ATTCTTTTCA TCGCTTTTTC CTGAAAAAAC CATCGGCCCC GTCGTCAGGC ATCTCAAGGA ACTTCAGGAA AACCTCGGCG CCTTTGTCGA TCTTGCCGTA CAGCAGCATG CGCTGTACAG ATATATCGAT TCCATGAAAA CGAAACCGGC CAATCCTGAA CTGGCCGCGG CACTTGGCGG ACTTATCGTT ATGCTCCATC GCCAGCAGGA AAAAGAACGC AAAGCATTCA ACCAGACATT CAGGCGCTTT GATAACGACG AAACCGAAAC TCTTGTCACG GAGCTTCTCA ATCGATGA
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Protein sequence | MNGQSARRAK SGIIGTRQHF ERNNFTVVPI IAKKMAAVLN TICFKSPEGI GTPSLSGLFQ PHLNLQEELH RKERRSYYDT FEWRCFEHQT AVVVKNRTIS LLDLQSGVES APLSLKTSPS HFLPSILPPG TIRNRLESLA GLRALMKRCT IESDMVAFRI LDRIEKTTGF LFAETLFLIK GTRKERISGL ITLKPLKGFH DDIFIISRAL EEHFGTENRL DVKSVFRLLM DSAGLRVNDY NPKINLSLRP GNPVRISAAE LLLFTHGIMK CNEPGILGNI DTEFLHDYRV ALRRTRSLLS QIKGIFPPEI ILRYRQAFSD IGKKCNTLRD CDVYMLKQTA YFDTLPPLLA VHLSPFFGEL EATRKVELKR FSDFLRSKTY RTMLDEWQLL LKDVLSAPGT ERESDPGQEE SISVAVKTIG KAWKKVIRHG RAIPAEASDS ELHALRIDCK KLRYLLEFFS SLFPEKTIGP VVRHLKELQE NLGAFVDLAV QQHALYRYID SMKTKPANPE LAAALGGLIV MLHRQQEKER KAFNQTFRRF DNDETETLVT ELLNR
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