33 homologs were found in PanDaTox collection
for query gene Daci_5932 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_5932  HAD family hydrolase  100 
 
 
265 aa  546  1e-154  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0595  HAD-superfamily hydrolase, subfamily IIB  70.85 
 
 
278 aa  353  1e-96  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0616  HAD family hydrolase  69.96 
 
 
278 aa  353  1e-96  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4133  HAD family hydrolase  66.13 
 
 
271 aa  335  5.999999999999999e-91  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4067  HAD family hydrolase  62.68 
 
 
301 aa  331  1e-89  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4690  HAD-superfamily hydrolase, subfamily IIB  61.45 
 
 
275 aa  325  4.0000000000000003e-88  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0644  HAD family hydrolase  57.68 
 
 
283 aa  291  6e-78  Rhodoferax ferrireducens T118  Bacteria  normal  0.123589  n/a   
 
 
-
 
NC_010682  Rpic_1091  HAD-superfamily hydrolase, subfamily IIB  47.77 
 
 
297 aa  236  3e-61  Ralstonia pickettii 12J  Bacteria  normal  0.024164  normal 
 
 
-
 
NC_012856  Rpic12D_1184  HAD-superfamily hydrolase, subfamily IIB  47.37 
 
 
297 aa  235  6e-61  Ralstonia pickettii 12D  Bacteria  normal  0.24726  normal 
 
 
-
 
NC_003295  RSc1263  hypothetical protein  45.56 
 
 
295 aa  222  4e-57  Ralstonia solanacearum GMI1000  Bacteria  normal  0.151023  normal  0.478475 
 
 
-
 
NC_007973  Rmet_2056  HAD family hydrolase  47.37 
 
 
268 aa  219  3e-56  Cupriavidus metallidurans CH34  Bacteria  normal  0.413042  normal 
 
 
-
 
NC_007347  Reut_A2053  HAD family hydrolase  46.21 
 
 
287 aa  217  2e-55  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3500  HAD family hydrolase  41.53 
 
 
267 aa  199  6e-50  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.126173 
 
 
-
 
NC_009636  Smed_2700  HAD family hydrolase  38.87 
 
 
270 aa  181  1e-44  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0610  HAD family hydrolase  36.59 
 
 
282 aa  162  6e-39  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.00000152168 
 
 
-
 
NC_010581  Bind_2219  HAD family hydrolase  32.24 
 
 
259 aa  158  1e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0769  HAD family hydrolase  35.94 
 
 
257 aa  155  4e-37  Maricaulis maris MCS10  Bacteria  normal  0.0183682  normal  0.618821 
 
 
-
 
NC_008709  Ping_2097  HAD family hydrolase  33.46 
 
 
268 aa  153  2.9999999999999998e-36  Psychromonas ingrahamii 37  Bacteria  normal  0.978592  normal  0.811139 
 
 
-
 
NC_008544  Bcen2424_6271  HAD family hydrolase  33.33 
 
 
263 aa  148  7e-35  Burkholderia cenocepacia HI2424  Bacteria  normal  0.274563  normal  0.690052 
 
 
-
 
NC_008060  Bcen_1558  HAD family hydrolase  33.33 
 
 
263 aa  148  7e-35  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06400  hypothetical protein  34.07 
 
 
274 aa  147  2.0000000000000003e-34  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010512  Bcenmc03_6760  HAD family hydrolase  33.33 
 
 
263 aa  145  7.0000000000000006e-34  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5196  HAD-superfamily hydrolase, subfamily IIB  32.96 
 
 
278 aa  142  5e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5210  HAD-superfamily hydrolase, subfamily IIB  36.07 
 
 
281 aa  139  4.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.43756 
 
 
-
 
NC_011729  PCC7424_0088  HAD-superfamily hydrolase, subfamily IIB  27.46 
 
 
265 aa  98.2  1e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0509044 
 
 
-
 
NC_008312  Tery_3874  HAD family hydrolase  29.32 
 
 
260 aa  97.1  3e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0597322 
 
 
-
 
NC_007413  Ava_3590  HAD family hydrolase  28.34 
 
 
270 aa  93.6  3e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.684772  normal  0.0477257 
 
 
-
 
NC_011884  Cyan7425_5151  HAD-superfamily hydrolase, subfamily IIB  28.23 
 
 
321 aa  90.1  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0566  HAD family hydrolase  27.64 
 
 
251 aa  80.1  0.00000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0688357 
 
 
-
 
NC_007355  Mbar_A2337  phosphoglycolate phosphatase  26.12 
 
 
226 aa  46.2  0.0006  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.488898  normal  0.0135027 
 
 
-
 
NC_009921  Franean1_0293  Cof-like hydrolase  24.74 
 
 
268 aa  44.3  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.449147 
 
 
-
 
NC_013595  Sros_8838  hypothetical protein  41.79 
 
 
572 aa  43.5  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.139707 
 
 
-
 
NC_009636  Smed_1945  HAD family hydrolase  20.7 
 
 
250 aa  42.4  0.009  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.238634 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>