Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2337 |
Symbol | |
ID | 3625322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2962655 |
End bp | 2963335 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637701208 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_305840 |
Protein GI | 73669825 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01482] Sucrose-phosphate phosphatase subfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB [TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.488898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0135027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA AAGCTATTGT AGCCGATATA GACGGTACAA TCACCTGTGA GAAAAGGGAA CTTCATCTGG GGGCCATGAA AAAGATCCGT TCTCTTAAAA TTCCTGTAGT GCTTGCCACA GGAAATACTC TATGTTATGC AAGGACAGCT TCAAGGCTTA TCGGCCTGGA AGGGGCTGTA ATCGCAGAAA ACGGAGGGGC TGTTACCGTC CGCTTTGATT TGCAGGGCGC TTTTGAGGAA AGCCTTGAGG AATGCGAGAA AGCCTATTCT TTTCTTTCCG ACTATTTCAA GCTCACCAAA CTTGACCCTT TATACCGAAA AACCGAAATT GCCCTCAGGA GAGACTTTGA TATAGAAAAA GCCAGAACCC TTCTCAAAAC TCTGGATCTG GATGTAGAGA TGGTTGATAC CAAATATGCC ATCCATCTCA AGAGCACGAA AATCAATAAA GGGATCGGCC TTCAGAAGCT TGCAGGCATG ATGAGCCTAA AATCCAAAGA TTTCGTAGCC ATAGGAGATT CCGAAAACGA CTTAGAAATG TTTGAAGTCT CAGGTTTCGG AATTGCTGTC AGAAACGGGG ATGAAACAAT AAAAAAAGCT GCTAATTATG TTACAGCGGC ATCATTTGGG GATGGGGCTG TAGAAGCCAT CGAGTATCTA GAGTCAAAAG GCTGGATTTG A
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Protein sequence | MKFKAIVADI DGTITCEKRE LHLGAMKKIR SLKIPVVLAT GNTLCYARTA SRLIGLEGAV IAENGGAVTV RFDLQGAFEE SLEECEKAYS FLSDYFKLTK LDPLYRKTEI ALRRDFDIEK ARTLLKTLDL DVEMVDTKYA IHLKSTKINK GIGLQKLAGM MSLKSKDFVA IGDSENDLEM FEVSGFGIAV RNGDETIKKA ANYVTAASFG DGAVEAIEYL ESKGWI
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