Gene Aave_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4067 
Symbol 
ID4665733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4519696 
End bp4520601 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID639825254 
ProductHAD family hydrolase 
Protein accessionYP_972382 
Protein GI120612704 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACT CCGACGCGCC TTCCCTTTCT CCAGCAGGCC TGCAGCCGCT GGCCCTCTGG 
CACGCGCCCG GTGACCTGAT CGGCGTCTTC ACCGACATCG ACGACACGCT GACCACCGAC
GGCGCCATCA CCGCCGATGC ACTGGACGCG CTACAGGCGC TGCGGCATGC CGGGCTCGCG
GTGATCCCCG TCACAGGCCG TCCAGCGGGA TGGAGCGAGC CGTTCGCGGC CTCCTGGCCG
GTGAATGCGA TCGTGGCGGA GAACGGCGCT GTCGCCATGG TGCGCGTGGC CGGAGCGGAC
GCGGGGGAAG CCCCCACCCC CTGCGGAGAA GGCGCCGTGG TGGTGCATCC CGCGGGGCCG
GGCGGGCCGG CGCTGTGCAA GCTCTACCAG CAGGACGCCG CCACGCGCGC GGTGCAATAT
GCGCGCATGC AGCAGGTGCT TGCACGGATC GAACACGAGG TGCCGGGAGC ACGGCGGGCC
ACGGACTCCG CGGGACGGGA ATGCGACATC GCCATCGACC ACAGCGAATT CACGCACCTG
CCCCAGGAAA CCATCGATGC CGTCGTGCAG CGCATGCGCG CCGCAGGCAT GCACGCCACG
GTGAGCAGCA TCCACATCAA TGGCTGGTAC GGCGACCACG ACAAGCTCGC CGGCGCGCGC
TGGATCGTTC GTGAACTCTT CGGCCGCGTG CTGGACGACG AGATCGGCCG CTGGGTCTAC
GTGGGCGACT CCACCAACGA CCAGAAGATG TTCGAAGCCT TTCCGCACAG CGTGGGCGTG
GCCAACATCG CCCGGTTCGT CTCGCAGCTG GTGCATCGGC CGCGCCACGT CACGCGCGCG
GAGCGCGGTG CCGGCTTCGC CGAAGTGGCG CGCGCGATAC TGCAGGCCGG CAGGGCCACC
GCCTGA
 
Protein sequence
MPHSDAPSLS PAGLQPLALW HAPGDLIGVF TDIDDTLTTD GAITADALDA LQALRHAGLA 
VIPVTGRPAG WSEPFAASWP VNAIVAENGA VAMVRVAGAD AGEAPTPCGE GAVVVHPAGP
GGPALCKLYQ QDAATRAVQY ARMQQVLARI EHEVPGARRA TDSAGRECDI AIDHSEFTHL
PQETIDAVVQ RMRAAGMHAT VSSIHINGWY GDHDKLAGAR WIVRELFGRV LDDEIGRWVY
VGDSTNDQKM FEAFPHSVGV ANIARFVSQL VHRPRHVTRA ERGAGFAEVA RAILQAGRAT
A