| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_0293 |
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| Symbol | |
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| ID | 5668717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 345121 |
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| End bp | 345927 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641239223 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_001504665 |
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| Protein GI | 158312157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.449147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGACT GGTTACTTGT GTCCCGTCCC GTTCTCGTCG CCACCGACCT GGACGGAACC
CTGATCCGCA CCGACGGCAC CGTCTCCGAC CGGACCAGGG ACGCCCTGCG ACAGGTCGAG
AACTCCGGCT CCACGGTCGT GTTCGTCACC GGCCGTCCCA CCCGGGTGAT GGCGGACGTC
GTCCGGCAGA CCGCGGTCTC GGGCCTCGCC ATCTGCGCGA ACGGCGCACT CGTCTACGAC
CTCGACACCG GCGTTCCGGT AAGCCAGACG ATTCTGGAGA CGCCCGCGGC GTTGAAGCTG
GCCGCCGCGA TCCGGGCAGC GGTACCCGAC GCCACCTTCG CGGTGGAGAG CGGCGTGCGA
TTCGGCCGCG AACCCGATTT CCTGACCATG TGGCCGGATC CGGGCGAACT GGTCGCCGGT
TTCCACGAGC TGCTCGAGCA CCTGCCTGCG ACGAAGCTGC TGGTCCGCCG GGGCGGCGCG
TCGCTGGCCG ACGTGTACGA GACGGTCGTC GCCCTGGCCG GAACCGAGGC GGTCGTGACG
ACGTCCAGTC ACGACCTGAT CGAGATCGCC GGCCCGGGGG TGTCGAAGGC CGTCGCGCTG
GCTGAACTGG CGAGCGAGCG CGGTGTGCTC GCCGCCGAGG TGGTCGCGTT CGGCGACATG
CCCAACGACC TGCCCATGTT CGCCTGGGCC GGGCATTCGG TAGCGGTCGC CAACGCCCAT
CCGGACGTCC TCGCCGCCGC CGACGAGATC ACCGCGTCGA ACGACGACGA CGGTGTCGCT
CAGGTACTGG AACGGCTGTT TTCCTGA
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| Protein sequence | MVDWLLVSRP VLVATDLDGT LIRTDGTVSD RTRDALRQVE NSGSTVVFVT GRPTRVMADV
VRQTAVSGLA ICANGALVYD LDTGVPVSQT ILETPAALKL AAAIRAAVPD ATFAVESGVR
FGREPDFLTM WPDPGELVAG FHELLEHLPA TKLLVRRGGA SLADVYETVV ALAGTEAVVT
TSSHDLIEIA GPGVSKAVAL AELASERGVL AAEVVAFGDM PNDLPMFAWA GHSVAVANAH
PDVLAAADEI TASNDDDGVA QVLERLFS
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