43 homologs were found in PanDaTox collection
for query gene Cthe_2545 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009012  Cthe_2545  signal transduction histidine kinase regulating citrate/malate metabolism  100 
 
 		 361 aa  753    Clostridium thermocellum ATCC 27405  Bacteria  normal  0.290644  n/a   
 
 
-
 
NC_011898  Ccel_2641  signal transduction histidine kinase regulating citrate/malate metabolism  58.44 
 
 		 423 aa  496  1e-139  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_2424  signal transduction histidine kinase regulating citrate/malate metabolism  54.88 
 
 		 423 aa  455  1e-127  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2647  signal transduction histidine kinase regulating citrate/malate metabolism  43.92 
 
 		 426 aa  315  7e-85  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2346  signal transduction histidine kinase regulating citrate/malate metabolism  28.57 
 
 		 609 aa  97.8  3e-19  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.600899 
 
 
-
 
NC_013204  Elen_1814  ATP-binding region ATPase domain protein  28.28 
 
 		 614 aa  90.1  6e-17  Eggerthella lenta DSM 2243  Bacteria  normal  0.211625  normal  0.35963 
 
 
-
 
NC_002967  TDE0032  histidine kinase-related ATPase, putative  27.08 
 
 		 248 aa  87.4  3e-16  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.00000737644  n/a   
 
 
-
 
NC_010001  Cphy_3117  signal transduction histidine kinase regulating citrate/malate metabolism  26.94 
 
 		 342 aa  82  0.00000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  0.853672  n/a   
 
 
-
 
NC_013174  Jden_0469  ATP-binding region ATPase domain protein  25.85 
 
 		 444 aa  80.5  0.00000000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_02250  histidine kinase  22.22 
 
 		 450 aa  74.3  0.000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_2269  signal transduction histidine kinase regulating citrate/malate metabolism  24.23 
 
 		 442 aa  70.5  0.00000000004  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_1751  sensor histidine kinase VirS  24.4 
 
 		 440 aa  67.4  0.0000000004  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0035916  n/a   
 
 
-
 
NC_011899  Hore_01630  signal transduction histidine kinase regulating citrate/malate metabolism  25.14 
 
 		 325 aa  67  0.0000000005  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_008532  STER_0582  signal transduction protein  26.63 
 
 		 431 aa  66.2  0.0000000008  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_2401  signal transduction histidine kinase regulating citrate/malate metabolism  21.45 
 
 		 456 aa  65.5  0.000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.283788  n/a   
 
 
-
 
NC_011830  Dhaf_3688  signal transduction histidine kinase regulating citrate/malate metabolism  23.08 
 
 		 280 aa  65.9  0.000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1481  sensor histidine kinase VirS  23.44 
 
 		 441 aa  64.3  0.000000003  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00000161061  n/a   
 
 
-
 
NC_008261  CPF_0499  sensor histidine kinase  21.18 
 
 		 431 aa  63.9  0.000000004  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0000246195  n/a   
 
 
-
 
NC_010001  Cphy_0975  signal transduction histidine kinase regulating citrate/malate metabolism  23.12 
 
 		 242 aa  63.2  0.000000007  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_0430  ATP-binding region ATPase domain protein  23.92 
 
 		 313 aa  62.4  0.00000001  Eggerthella lenta DSM 2243  Bacteria  normal  1  hitchhiker  0.0000157774 
 
 
-
 
NC_010001  Cphy_1601  signal transduction histidine kinase regulating citrate/malate metabolism  22.45 
 
 		 446 aa  60.5  0.00000004  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.00658825  n/a   
 
 
-
 
NC_011899  Hore_14600  signal transduction histidine kinase regulating citrate/malate metabolism  22.82 
 
 		 445 aa  58.2  0.0000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000227922  n/a   
 
 
-
 
NC_013216  Dtox_3198  signal transduction histidine kinase regulating citrate/malate metabolism  23.92 
 
 		 456 aa  57  0.0000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000728956 
 
 
-
 
NC_013216  Dtox_0401  signal transduction histidine kinase regulating citrate/malate metabolism  27.87 
 
 		 479 aa  56.2  0.0000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008262  CPR_0487  sensor histidine kinase  20.94 
 
 		 431 aa  55.8  0.000001  Clostridium perfringens SM101  Bacteria  normal  0.0885624  n/a   
 
 
-
 
NC_007644  Moth_1579  signal transduction histidine kinase regulating citrate/malate metabolism  21.61 
 
 		 277 aa  53.9  0.000004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000246185  normal  0.151427 
 
 
-
 
NC_010424  Daud_0745  signal transduction histidine kinase regulating citrate/malate metabolism  22.22 
 
 		 460 aa  53.1  0.000008  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0499  signal transduction histidine kinase regulating citrate/malate metabolism  23.08 
 
 		 287 aa  53.1  0.000008  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000111074  n/a   
 
 
-
 
NC_009436  Ent638_3378  signal transduction histidine kinase regulating citrate/malate metabolism  23.7 
 
 		 545 aa  52  0.00002  Enterobacter sp. 638  Bacteria  normal  0.960766  normal  0.505448 
 
 
-
 
NC_007644  Moth_1622  signal transduction histidine kinase regulating citrate/malate metabolism  25.26 
 
 		 275 aa  51.6  0.00002  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_0515  signal transduction histidine kinase regulating citrate/malate metabolism  23.79 
 
 		 526 aa  47.8  0.0003  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3731  signal transduction histidine kinase regulating citrate/malate metabolism  24.53 
 
 		 532 aa  47.8  0.0003  Serratia proteamaculans 568  Bacteria  normal  0.95506  normal  1 
 
 
-
 
NC_013411  GYMC61_1377  signal transduction histidine kinase regulating citrate/malate metabolism  22.82 
 
 		 525 aa  47.4  0.0004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_0863  putative sensor histidine kinase  24.88 
 
 		 420 aa  47  0.0005  Clostridium perfringens ATCC 13124  Bacteria  normal  0.147928  n/a   
 
 
-
 
NC_009901  Spea_1358  PAS/PAC sensor signal transduction histidine kinase  29.73 
 
 		 371 aa  45.4  0.001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_2325  signal transduction histidine kinase regulating citrate/malate metabolism  24.39 
 
 		 531 aa  45.4  0.002  Dickeya zeae Ech1591  Bacteria  normal  0.18048  n/a   
 
 
-
 
NC_013216  Dtox_0471  signal transduction histidine kinase regulating citrate/malate metabolism  23.14 
 
 		 225 aa  43.9  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.0687563 
 
 
-
 
NC_008255  CHU_1987  PAS/PAC sensor signal transduction histidine kinase  28.69 
 
 		 577 aa  43.1  0.007  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0904  signal transduction histidine kinase regulating citrate/malate metabolism  23.53 
 
 		 241 aa  43.1  0.007  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012030  Hlac_3664  PAS/PAC sensor signal transduction histidine kinase  22.67 
 
 		 708 aa  43.1  0.008  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_002967  TDE0148  histidine kinase-related ATPase, putative  26.5 
 
 		 289 aa  43.1  0.008  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A3042  histidine kinase domain protein  23.9 
 
 		 406 aa  42.7  0.01  Bacillus cereus AH187  Bacteria  hitchhiker  0.00679309  n/a   
 
 
-
 
NC_013421  Pecwa_2021  signal transduction histidine kinase regulating citrate/malate metabolism  22.82 
 
 		 534 aa  42.7  0.01  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>