Gene Dhaf_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2424 
Symbol 
ID7259395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2615949 
End bp2617220 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content47% 
IMG OID643562310 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_002458888 
Protein GI219668453 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA TCGTGATTGG ACTCTTACGA TTTGGTGTTT CTTTGGTCTT TGGCCTCACG 
GTGTCCGTTC TCTTTGCTGG AATAGAGCCC ACAAAGAAAA ACAGGCTTGT CACCGGCCTG
CTCTGTGTCA TTTTTCTTTT TGTCCAGACC GCCAGCTATT GGCTTTTGGG CTTGGATTTG
ACATCAAAGC TGTATCCGCT GATTATCCAC CTGCCGCTGA TTGTGATATT CACCCTATAC
TATAAGCGCC CGTGGCTCAT ATCCGCCGTC AGCGTGCTTT CCGGTTATCT TTGCTGTCAA
GCGCCGCGCT GGTTTGGTTT CCTTGCAGGA GCCGCTTTAG ACAGCAGGCT TGCAGACCAT
CTTTTTTACA TAGCATTCGT GTTTTTGGCC TATTATTTCT TGAAAAGATA TGTAGCCGGA
TCTGTTCGGC AGTTGATGGA GAAGTCCACG AAATCCTGCT TGTTTTTAGG CGGAGTCCCG
CTTTTTTACT ATCTGTTTGA CTATGTGACC GCCATCTACA CCGATGTACT TTACAGCGGA
ACCGAATGGG CGGTACAGTT CATGCCCTCA ACAATATCTG TTTTCTATTT TGTGTTTGTG
ATCCTTTACT ACGCTGAGAC ACAAAAACAG GCAAGCCTTC AAAGAGAAAA GGATATGCTG
GATGCACAGT TTAGACTGGC GCAGACAGAG TTTGCTTCTC TGCGGCAGTT ACAGCAGAAC
GCCGCATCCT ATCGGCATGA TATGCGCCAC CATTTTTCAC TTTTACAGGG ACTTGCATCC
AGGGAACACA TCGAGGGGAT CAAAGAGTAC CTACAAACTG CCCAGTCCGA CATGGATGCC
ATCACGCCCA CACGCTTTTG TGGAAACGAA ACCGTCAACC TGATTTTGTC CGCTTTCGCT
ACAAAAGCGA AACAAGGGTC AATCATGCTG ACGGTAGATG CGAAACTGCC TGATTTGCTT
CCCTTTAGCG ATACTGAGCT TTGCTCGCTC TTGTCAAACG CTTTGGAAAA TGCTATCCAT
GCCTGTGAAC AGATACCTGA CAGCAACAAA CGCATCATCC GGCTGCGTAT GTATTCCAAA
AATAATAAGC TGTGCATTGA TCTGCACAAT AGCTTTCAGG CAGAGCCAAT ATTTCAACAA
GGGTTTCCAG TATCAAAAGA ACAGGGGCAT GGCTTTGGCA CAAAAAGCAT CGCTCATATC
GTGGAAAAGC ATGGCGGTGT ATTTCAGTTT TCGGTTAAGG ATGGCTGGTT TATATTTCAG
GCTACCGCAT AG
 
Protein sequence
MAVIVIGLLR FGVSLVFGLT VSVLFAGIEP TKKNRLVTGL LCVIFLFVQT ASYWLLGLDL 
TSKLYPLIIH LPLIVIFTLY YKRPWLISAV SVLSGYLCCQ APRWFGFLAG AALDSRLADH
LFYIAFVFLA YYFLKRYVAG SVRQLMEKST KSCLFLGGVP LFYYLFDYVT AIYTDVLYSG
TEWAVQFMPS TISVFYFVFV ILYYAETQKQ ASLQREKDML DAQFRLAQTE FASLRQLQQN
AASYRHDMRH HFSLLQGLAS REHIEGIKEY LQTAQSDMDA ITPTRFCGNE TVNLILSAFA
TKAKQGSIML TVDAKLPDLL PFSDTELCSL LSNALENAIH ACEQIPDSNK RIIRLRMYSK
NNKLCIDLHN SFQAEPIFQQ GFPVSKEQGH GFGTKSIAHI VEKHGGVFQF SVKDGWFIFQ
ATA