Gene Dtox_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0401 
Symbol 
ID8427336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp410970 
End bp412409 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content35% 
IMG OID645032789 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_003189967 
Protein GI258513745 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTTAT CAGTGCAGGA TATCGTACCT ATTCAACTAC CTATCCTTTT AGGGTTCAAA 
ATTATCCTTT TGGGAAATTA TGCAGGAATG GAGGAGGCGA ACCAGTATTT TATGTCAATA
AATGAATTAA TCATAACATT GATACTCATT TCTATTCCTC AAAGCCTTGT TGTTAACATT
TTGGCAGCTC AACTCTTAGG TATATATAAA AAGGAGATCA TTAAACAACT CATTCTAGTT
GGGTTGATCG ACGGTTTAAT CTCATTTACG GTTTACATGC TCAGACTTCC CTATGGCCTA
CACATGGTAG TTAATTTATT CCTATTTATT TTTGTTGCTC AATTGTTGCT TGGAATTCAT
ATGAATCAAG CTGTTTATTT AACGATTACA GCTTATGCGG CTGCTCTAAT CTTTGAAAGT
GGTGTCGTAG CTGTGATGCT TTTCATTACG GGTCTATCAC TGGATGAATT GATAGATAAT
TTTAATTTGC GGCTGACATT TACCTGTACA GGAATTATGT TGGCAGGAGG GGCTGTCTAC
TGGCTGATTA GTAGAAATAT ACGCATAGCT GGTATTGAAA AAGTAGCTGA TTTTACTAAA
AGCTATGGTC ATAGCATATT TATAGCTTTT ATTCAAATTG CTTTATTAGG AGTTGTGTTT
ATATATTCTC GCCTTCAATC TCCATCTTAT TTTAATTTAA TTAAAGCAGA GGTGTTTTGG
GGAATCGCAG GAGGGTTATT TTTAATTCTT AATATTTGGT TAATTCTTTC ACTTACGGCT
GCTGTTCAAA GAGAAACAAT TCTTTTAGCC AATGAGGCTT ATATGAAGAA TATTGAAGAG
CTTTTTTTGA ATTATCGATC TCAACGTCAT GACCTTTCCA ATCATTTTCA AACTCTGAAT
TCCTTACTGA AAGCAAACAA AATTGAAAAG GCTTTAGATT ATCTAAAGGA CTTAAATAAA
GAAACCGTAG CCACCAATAT GGTGTTAAAA TTTGGCAATC CGGTTCTGGT CGCGCTGCTT
CAGGTAAAAA TTGCTAAAGC AGAACAAAAG AGTATTCTCT TAGACCTATT CATTGGAGAT
GAACTTACGC ATATTGCCCT TCAATCATTT GAACTAGTTA AATTAGTAGG TAACTTGCTG
GACAATGCCT TGGAAGCAGC CGAAAATTCA ACAATTAAAC AAAAAAAGGT AAGTTTTGAG
ACCAAGAACT ACAATAGACT AAAAGTTATT TGCATTCGTA ATTATGGAAT TTATATAGAC
CCAGACATAA TGGAAAAAAT ATTTGAACCC GGTTTTTCGA CAAAAGATGG ACATTCGGGA
ATTGGGCTAT CCATTTGTCG ATCACTTGTT GAAAAGTATA GGGGAAATAT AGAAGTTTAC
AATGTGGAGG AGGGTACAAT GGTTGAAGTA ACAGTAGCGA GTACAGTGAA GAAGTCATGA
 
Protein sequence
MQLSVQDIVP IQLPILLGFK IILLGNYAGM EEANQYFMSI NELIITLILI SIPQSLVVNI 
LAAQLLGIYK KEIIKQLILV GLIDGLISFT VYMLRLPYGL HMVVNLFLFI FVAQLLLGIH
MNQAVYLTIT AYAAALIFES GVVAVMLFIT GLSLDELIDN FNLRLTFTCT GIMLAGGAVY
WLISRNIRIA GIEKVADFTK SYGHSIFIAF IQIALLGVVF IYSRLQSPSY FNLIKAEVFW
GIAGGLFLIL NIWLILSLTA AVQRETILLA NEAYMKNIEE LFLNYRSQRH DLSNHFQTLN
SLLKANKIEK ALDYLKDLNK ETVATNMVLK FGNPVLVALL QVKIAKAEQK SILLDLFIGD
ELTHIALQSF ELVKLVGNLL DNALEAAENS TIKQKKVSFE TKNYNRLKVI CIRNYGIYID
PDIMEKIFEP GFSTKDGHSG IGLSICRSLV EKYRGNIEVY NVEEGTMVEV TVASTVKKS