| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2401 |
|---|
| Symbol | |
|---|
| ID | 4282050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2730677 |
|---|
| End bp | 2732047 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638139285 |
|---|
| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| Protein accession | YP_755061 |
|---|
| Protein GI | 114567907 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.283788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTCTG TACCCTGGTA TGCTATTGTT CTTATCGCCG TACCACAAAC CATCTTGATA
ATAAAAATTG GCTTTGGCTT GTTCAATTTG CAGGTGCATG CCCGCCAGTG TTTGCTGGCT
ACGCTGATAG TGTCGGTGGT TACTTACTTT TTGAGAAAGC TGCCTTTGAT GTTTGGAATT
CATACGATAA TACTGGTTAT CTTATTGACT ATCCTTTTAG TAATTTTGCA GCGAATCGAT
TTTTGGCGAA GTTTGGTTGC AGTTTTACTG GGAGTTATGA TATTAGGTGT AATTGAAAAT
TCCTATTTGC CGCTATTATT GCAGTTTACT TCCAGGAATG TGATGGACCT GGCGGAACAA
CCCTGGTTTA ATATAGCTGC ATTCCTGCCC GGATTCCTTA TTGGCTTGCT TTTATATGCC
TTTATCCGTC ACCGCAAATT TGTCCTGTTT GATTTAAAAA GAGCTGGGGA AGTCCAAAAA
CCGGTTAATC ATGGGGTATA TATTATTGCG GTCATACTAT TGCAGAGCTT TTTGCTGGTC
TTGATCGGTG CTGCTCTGCT GGTGAATCAA CAACGCTTCA ATATTGCTGT CATCGTTCCC
TGGGCGAACA TGGCCATATT GCTGGTAGCT TTATTGAGCA TAGCAGCCAT AAAACAATTG
GAGGAAAATA GCCGTAACAG TCAAAGGGTC CAACTATTAA AGAGTCACTT GCAACAGGTG
GAGTTGCTAT TAAAGGTCCT ACAGAGCCAA AAGCACGAAT ACAGCCGGCA TATTCAGGCT
ATACAGTCCC TGGTTTATTT AAAGCGCTAT CAGGAAATCA AAGAATACAT TGAAGGAATC
GCTGAAGAAT ACTGGCATAT GGAAGAAGTC CTTTATACTA GTCATCCGGT GCTTACCGGA
TTGCTAAACA GCAAACGCAG TTTTGCCGAA TCCCAGGGTA TAGAGTTGGC GGTAGCAGTG
AAATGTGACC CGGCCGGGAT ACCCATCCCC CCCTGGGATT TATGCAGCAT ATTGGGCAAC
CTCCTGGATA ATGCAATGGA AGCAGCCCTG GAGGACAAAG GCAAGCCCCG GGTAGCGATA
GAATTCAAAT ATGAATTCCC CTATTATGTA ATCTATATTC AAAATAACGG GGCCAGGATT
TCCGCCGCTG AGAAACAACG GATATTCGAA CCGGGCTATA CCAATAAGGA TTCTCCGGCC
CGGGGTTATG GACTCTACCT GGTCAGCAGG CTGCTGGAGC GCTACCAGGG GACGATCGAA
GTTACGAGCA AGGGACAAAC CAGTATAATC GTAAGATTAG CTGATAAAGG CAGCAATACA
GCTGCTGGTA AAAGCTATAG CAGCTTGGAG AGCTGGATGA CCGGGGGTTG A
|
|---|
| Protein sequence | MYSVPWYAIV LIAVPQTILI IKIGFGLFNL QVHARQCLLA TLIVSVVTYF LRKLPLMFGI
HTIILVILLT ILLVILQRID FWRSLVAVLL GVMILGVIEN SYLPLLLQFT SRNVMDLAEQ
PWFNIAAFLP GFLIGLLLYA FIRHRKFVLF DLKRAGEVQK PVNHGVYIIA VILLQSFLLV
LIGAALLVNQ QRFNIAVIVP WANMAILLVA LLSIAAIKQL EENSRNSQRV QLLKSHLQQV
ELLLKVLQSQ KHEYSRHIQA IQSLVYLKRY QEIKEYIEGI AEEYWHMEEV LYTSHPVLTG
LLNSKRSFAE SQGIELAVAV KCDPAGIPIP PWDLCSILGN LLDNAMEAAL EDKGKPRVAI
EFKYEFPYYV IYIQNNGARI SAAEKQRIFE PGYTNKDSPA RGYGLYLVSR LLERYQGTIE
VTSKGQTSII VRLADKGSNT AAGKSYSSLE SWMTGG
|
|---|
| |