Gene Cphy_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0975 
Symbol 
ID5743916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1243305 
End bp1244033 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content32% 
IMG OID641292084 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_001558096 
Protein GI160879128 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGTG GAAAGAAAAA CATTTGGAAT CAAACCTTGG ATCATACAGC TTCTGAACTA 
TTAGCAGAGA AGATGGAGTT AGAATATCAG TATGAGGAGC TGCTTAGAAA ATATGAAGAA
CAGCAATATC AAAAAGAAAA GATAGATCAA CTGCATGAAA ATACCAGAAG ATTAAAACAT
GATATGAAAA ATCATATGCT TGTATTAGCA AATTATTTAA ATCAAGAAAA TGTGTATGAA
GCGAAACAGT ATCTATCTAA AGTCTTGGAC AAATTAAATC ATATCTACAC TTACATAGAA
ACTGGGAATG CAGTTTTAAA TTCTTGCATT AATACCAAAT TGGAAATGGC TCACCAAATG
GGGATTACGT TTAAAGCGGA AATAGAGAAT CTTTCTTTTT CAAAACTGGG TAGTATAGAT
TTAACCGCCT TACTAATGAA TCTTTTAGAT AATGCCTTGG AAGCTAGTCA AAGAGAAGAG
AGGAAAGAAA TACAGATACA GATTATTAAA AAAAGAGGGT ACGAGACGAT CTTAGTTAAG
AATTTTATTT CGAATTCTGT ATTGCAATAC AATAAAGATT TGAAAACAAC AAAGACTCAA
AACTCAAAAG AACATGGATA TGGATTAGTA CAAATTAGAA GCATTGTCGA GATGTATCAT
GGAATGATCG ACATATATGA AGAGGAAGGT TGGTTTTGTT GTTTCATTGC GTTTCCATTG
TCAGATTAG
 
Protein sequence
MIGGKKNIWN QTLDHTASEL LAEKMELEYQ YEELLRKYEE QQYQKEKIDQ LHENTRRLKH 
DMKNHMLVLA NYLNQENVYE AKQYLSKVLD KLNHIYTYIE TGNAVLNSCI NTKLEMAHQM
GITFKAEIEN LSFSKLGSID LTALLMNLLD NALEASQREE RKEIQIQIIK KRGYETILVK
NFISNSVLQY NKDLKTTKTQ NSKEHGYGLV QIRSIVEMYH GMIDIYEEEG WFCCFIAFPL
SD