Gene Dtox_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2346 
Symbol 
ID8429330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2517843 
End bp2519672 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content43% 
IMG OID645034651 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_003191780 
Protein GI258515558 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.600899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCCA GGAAGATCTG GCTTCTCACC CTGGCTGCCC TGTGTTTTTC AGGTTTGTTG 
ATGTGTGCCG ATCTCATAAG CGGCAGCCGT GGCCTGTTTT ATAATACCGA TACGCACACC
ATGAACACAG GCTGGAAAAT ATCCGGTGGT ACCAAAACCC TGTACGAAGC TGCCTCTTTT
GCTAAAGCAG GTTCTTTGAA AAATGAGCAC TTGGCAGTCC TCACTAAGAC ACTGCCTGCC
ACGGTAGATC AAAGCGTATG CTTTGTCACC ATCGGCTACC GCGTGGCAGC CTTTGTCAAT
GATCAAGACA TTTACACCTT CAACCCCCCT TTGGACAGCA AAGAGGTCCG GGGAGTAAAA
ACCCATATAC TTAAAATACC CGACGGCACA GACGGCAGGG AGTTCAGGCT GGTGTTGGCA
ACTAATCAAC CAGGGAACAC AGCGGTGTCC AAATATATTA TATTGGATAA TGCCATAGAG
ATAATCAGGG CTTTACAAAA ATCCGACCTG ATGAAATCAG CTTTCGCGTT GCTTTATATA
TTTATCGGCA TATCCATATT GATATTTACA CTGATTTCAG CTATTTTAAA AAAATTCGAC
CTTTCTCTAT TGATGCTCGC TCTAATAGCG CTGTTTATAG GGACAGGCAT TTTATTAAAT
CTCAGCAGCA TTGCTTTTTA TACAGGGCCG GAGGCTGTTT ACTGGATGGT GAATATCATA
AATCTGGCGC TGCCTATACC GGCGTTATTA TTTGTAGCGG CGGACAGGGG CTATGCCCAA
AGCAGGCTGC TTACAGCAAT GGCCGTTGTC CAGAGCGTGT TTCTGGCAAT ATGGTTAGTC
TGTAACTTTT TAAATATTGA TATTATTTTT CTGCACTGGC AGCCGGCATT GTTTGCCGCC
ATCCTGGCAG GCCTCATCAT TACCTTCGTA AAAGAATTCA AATCCGGCTC CGGACGGCCG
GAAATTGCTG TCTCAGTCAT TGCCATTTTA TTGACCTCAG TAATCAATGC CCACAGTTAT
TTTACTGCCG GAAGATATGA GACAATGGAT TTCAGCTTAA TCATTACGGC TCTTCCGGTC
CTTGTACTAA TGACCGGAAA GGTGGTTCTA AGCTCTGCTC AAAAGGAATA CCGCATACTT
AATGAAAATA TGACCCTGCG GCTGGAAGGA GAACTTCTAT ATAAGAATTA TAACAAGACA
GAAAAGTACA TTGAAGAAAC CAAACGGATC TGGCATGATA TCGACAGGCA TTTTTCGGTG
ATCAGCAATC TGGCGGGGAA TGGGGTATAT GAAGAATTAA AACTGTATCT GAAACAGGTA
GGCTATGACT TTAAGAAAAT AAAGGAAACA TACCTCTGTG AAAACAAGCT AATCAACGCC
ATTTTAACCG AAAAAATTTC TGAAGCCGAA GACAGCGGAA TCGAAGTTAG ATTTACCGGA
AATTTGCCCG ATAAATTAAA AATACAGGGC AACGACCTGT GCAGCCTGTT GGTTAACATG
CTGGACAACG CTATTGAGGC TTGCATTAAA ATACCGGAGG GTCATAAGAA GAAAATTGAT
ATTTCTATCA GAATGAAGAA TGGTTTTATT TATTTCGGTG TCTTAAATAC TTCCCCTGTG
GCACCGGTTA TGGCCGGTGA AGACTTTATC ACATCAAAAG CAGATAAGAC AAAGCATGGG
TACGGTATTT CCATCATCCA GAGAATTACC CGGAAATACA ACGGCGCTTT TGATATTATA
CTTTCCAATA ACTCTTTCTT AGTCAAGGCT GCGTTAAAAA ATGCGGATGC CGGGGAATTC
TTTGCCAAAG ACTATAATGA CAACCTGTAA
 
Protein sequence
MSSRKIWLLT LAALCFSGLL MCADLISGSR GLFYNTDTHT MNTGWKISGG TKTLYEAASF 
AKAGSLKNEH LAVLTKTLPA TVDQSVCFVT IGYRVAAFVN DQDIYTFNPP LDSKEVRGVK
THILKIPDGT DGREFRLVLA TNQPGNTAVS KYIILDNAIE IIRALQKSDL MKSAFALLYI
FIGISILIFT LISAILKKFD LSLLMLALIA LFIGTGILLN LSSIAFYTGP EAVYWMVNII
NLALPIPALL FVAADRGYAQ SRLLTAMAVV QSVFLAIWLV CNFLNIDIIF LHWQPALFAA
ILAGLIITFV KEFKSGSGRP EIAVSVIAIL LTSVINAHSY FTAGRYETMD FSLIITALPV
LVLMTGKVVL SSAQKEYRIL NENMTLRLEG ELLYKNYNKT EKYIEETKRI WHDIDRHFSV
ISNLAGNGVY EELKLYLKQV GYDFKKIKET YLCENKLINA ILTEKISEAE DSGIEVRFTG
NLPDKLKIQG NDLCSLLVNM LDNAIEACIK IPEGHKKKID ISIRMKNGFI YFGVLNTSPV
APVMAGEDFI TSKADKTKHG YGISIIQRIT RKYNGAFDII LSNNSFLVKA ALKNADAGEF
FAKDYNDNL