Gene Dtox_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_3198 
Symbol 
ID8430192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp3398376 
End bp3399746 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content33% 
IMG OID645035444 
Productsignal transduction histidine kinase regulating citrate/malate metabolism 
Protein accessionYP_003192563 
Protein GI258516341 
COG category[T] Signal transduction mechanisms 
COG ID[COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000728956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGATC ATATGAGCAT TTTGCAACTC TTACTTGTCT CCCTGCCGGA AGCCGTTTTA 
TTGGCGGCGT TAGGCTTTAC CTTAATAAAC TTCCAGCCAC ACCTGCGGCA ATTATTACTA
ATAGGCATAT TCCAGACATT TGCTTCCTAT ATTGTAAGGG CATCTAAATT ATCTTTCGGC
CTGCACACTA TATTACTACT TTTAGTCTTT ATTCTAATAA TTCATTTAGT GACCCATTTG
AAAGTTTTTG TTTCATCGCT GGTAGGCTTA CTAGGGTTTA CTACTATAGC TCTAATAGAG
GCATTATATG TTCCGCAGTT ATTAAAGATA ACCGGTTACA CGATTGCAGA AATTCTCAAT
CACCCCATTA TGAGAATTTA TTTTTTTATC CCAGAAACAG GATTACTTTT AATGATTATA
TTATTGTGTC GACACTTTAA CATCAATATT ATGTCATACT TGGAGAGAAA AAAGACACAG
GTATCAGTTG CATTAATGAA GAAAAATAAT TTCGGTAATA ATAATTTTAA TAAGGAATAC
TTCTTACCGA TTACTTTAAT TCTTTTATCA ATTTGCTTAT TAGCGATGTT AAGTAATACT
TTTGTTTTTT TTCGATCAGT TTTACTCAAG GACTCATTTA TAAATATATT CTCAACTTTC
ATTGTTCTTG GAATTACTGT ATTAATATGC TTATTGGTAA TAATATTGAA AAATATTGCA
GGAATGATCG ATATACAGCA TAAAGCAAAA AAAACAAAAA AAACACTATC CCTTATAGAA
GAATTGGTCT ACACCATCCG CAAAAAACGC CATGACTTCA ATCACCATCT TCAGGCGGTA
TACGGTCTCC TCGAAACTGG TTTTCAACTG GAGGCCAGGG ATTACATCAG AAAAATATTT
TCCCATATAA GTACACATGA AGAACTTATT AAGACAGATA CCCCTGAGGT AAGTGCTATG
CTATATACAA AAATCGGCTT GGCAAAGAAA AATAACATTA ATCTCGAAAT AATAATTGAG
AATAGTTTAA AGGATTTACC ACTTAGTTTC GAGGAAACTA ACTCCATACT TGGTAACCTT
ATCGATAACG CTATGGAGGC AACCAATATT ATCAATGTTG AGAAACGCAA TATAACTATT
GAGCTAACCC GTAACTCTGA GGGATTCTGT TTTGAAGTAA CTAACCAAGG TAAATTAATT
AAACCAGAAA TTATCAATGA AATATTCAAA CCTCAATTTT CAACAAAGGA GGGGCGACCC
GGTTTAGGGT TGTCTATCGT TGAGGAAATA GTAAAACAAT ACAATGGAAC TATAACAGCG
TTTTCAAATA ACAAAAATAC AACCTTATCC ATTTTTATAC CAAAGAGGTG A
 
Protein sequence
MLDHMSILQL LLVSLPEAVL LAALGFTLIN FQPHLRQLLL IGIFQTFASY IVRASKLSFG 
LHTILLLLVF ILIIHLVTHL KVFVSSLVGL LGFTTIALIE ALYVPQLLKI TGYTIAEILN
HPIMRIYFFI PETGLLLMII LLCRHFNINI MSYLERKKTQ VSVALMKKNN FGNNNFNKEY
FLPITLILLS ICLLAMLSNT FVFFRSVLLK DSFINIFSTF IVLGITVLIC LLVIILKNIA
GMIDIQHKAK KTKKTLSLIE ELVYTIRKKR HDFNHHLQAV YGLLETGFQL EARDYIRKIF
SHISTHEELI KTDTPEVSAM LYTKIGLAKK NNINLEIIIE NSLKDLPLSF EETNSILGNL
IDNAMEATNI INVEKRNITI ELTRNSEGFC FEVTNQGKLI KPEIINEIFK PQFSTKEGRP
GLGLSIVEEI VKQYNGTITA FSNNKNTTLS IFIPKR