10 homologs were found in PanDaTox collection
for query gene Cthe_1922 on replicon NC_009012
Organism: Clostridium thermocellum ATCC 27405



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009012  Cthe_1922  hypothetical protein  100 
 
 		 322 aa  636    Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_24900  hypothetical protein  25.82 
 
 		 342 aa  134  3e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  0.165017  n/a   
 
 
-
 
NC_011830  Dhaf_2878  transcriptional regulator, XRE family  27.17 
 
 		 322 aa  116  5e-25  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00252317  n/a   
 
 
-
 
NC_010506  Swoo_4720  XRE family transcriptional regulator  25.1 
 
 		 327 aa  86.7  5e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008530  LGAS_0230  hypothetical protein  24.49 
 
 		 261 aa  82  0.00000000000001  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.00373466  hitchhiker  9.5849e-23 
 
 
-
 
NC_013203  Apar_1254  transcriptional regulator, XRE family  25.1 
 
 		 364 aa  72  0.00000000001  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002967  TDE1036  hypothetical protein  29.6 
 
 		 222 aa  61.6  0.00000002  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.000228622  n/a   
 
 
-
 
NC_013721  HMPREF0424_0514  DNA-binding protein  23.29 
 
 		 328 aa  52.8  0.000008  Gardnerella vaginalis 409-05  Bacteria  n/a    hitchhiker  0.00329657 
 
 
-
 
NC_013530  Xcel_2077  hypothetical protein  31.82 
 
 		 304 aa  50.4  0.00004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.823046  n/a   
 
 
-
 
NC_011832  Mpal_0869  pentapeptide repeat protein  30.56 
 
 		 290 aa  46.2  0.0008  Methanosphaerula palustris E1-9c  Archaea  normal  0.236368  normal  1 
 
 
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