Gene Dhaf_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2878 
Symbol 
ID7259886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3090111 
End bp3091079 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content46% 
IMG OID643562796 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002459337 
Protein GI219668902 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00252317 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTGG CGGAAAAGAT TTTGTCATTG CGTAAAAGCA ACGGCTGGTC TCAGGAAGAA 
TTGGCTGAGA AAATGAACGT ATCAAGGCAG TCTATATCCA AATGGGAAAG CGCCGCCGCA
ATACCGGATA TCAATCGGAT ACTGGAGCTG GCGAGGCTTT TCGGAGTAAC GACCGACTAC
CTGTTAAAAG ATGATTTTGA AACAGCAGTG TATTCCGGTG CAGATGAGAC GGAAAATTAT
ATACGCGTTT CTCTGCAGGA AATGAACGAT TTTTTAAAAA ACAATGCCAA CTATGGAAGC
CGGATCGCAT TGGGCGCTAT ACTGTGTATT CTCTCTCCGG TTTTGCTTAT TGTGTTGTCC
GCAGTCTCGA GGGCGGGTAT CGCCATAACT GAAAGAGCTG CCTCCGGCAT AGGCATTATG
ACGGTATTCT TGATGGTCGC AGGAGCTGTC GCCATCTTCA TTATCAGCAG TGCGAAGATG
GAACGCTTTG AATACCTGGA AAATGGCAAT TTTGAGCTTG AATACGGTTT GTCGGGCATT
ATAAAGGAAA AAAGGGCGGC TTTTGAAAAA ACACATGTTC AACGCACGGC GCTTGGTGTT
GTTCTCTGTA TTTTATGCCC CATCCCGCTT ATTGTCGCCG GCATATTCAG GGCTTCGAAC
ATGACTCTTT CTTGCTTTAC AGCTCTGCTA CTGGCGGTTG TTTCCGTCGC AGTATATCTT
TTTATCACCG TGGGTACGAT CAAAGGCGGT TATGATCAGC TGTTGCGTGA AGGGGAATTC
GAGCCGAAAG AGCAGGTGCG TGCGAAAAGA GTCTCAAAAT TTGCGGGAGT CTATTGGCCG
ATTGTTGTGG CGTTCTATCT TGGGTGGAGC TTTCTTACCA ACAATTGGGG GATTACTTGG
GTGGTTTTGC CGATTGCTGC GCTGATTTTT GCAGGCGTTT CCTCCATATT GCATTCATTA
GAAAGGTAA
 
Protein sequence
MILAEKILSL RKSNGWSQEE LAEKMNVSRQ SISKWESAAA IPDINRILEL ARLFGVTTDY 
LLKDDFETAV YSGADETENY IRVSLQEMND FLKNNANYGS RIALGAILCI LSPVLLIVLS
AVSRAGIAIT ERAASGIGIM TVFLMVAGAV AIFIISSAKM ERFEYLENGN FELEYGLSGI
IKEKRAAFEK THVQRTALGV VLCILCPIPL IVAGIFRASN MTLSCFTALL LAVVSVAVYL
FITVGTIKGG YDQLLREGEF EPKEQVRAKR VSKFAGVYWP IVVAFYLGWS FLTNNWGITW
VVLPIAALIF AGVSSILHSL ER