Gene Cthe_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1922 
Symbol 
ID4810780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2291932 
End bp2292900 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content38% 
IMG OID640107339 
Producthypothetical protein 
Protein accessionYP_001038334 
Protein GI125974424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACAA TTAAAAACTA TCTTGACAAC ATTTTTGCCA ATTTGCCAAA AACAAAGGAA 
ATGGAACGGC TAAAAAGCGA GATTTACTAC AACATGGAAG AAAAGTACAA TGAACTTAAA
AAAAGCGGAA AGCCTGAAAA TGAGGCAATC GGCATTGTTA TTTCCGAATT CGGCAATATT
GATGAACTGC TGGAGGAAAT GGGGATTTCC CCGTCATCAA ACAGTGAAAA CCATCCCGTA
ATAGAAAATG AAGAAGCAAT GGAATTTATC TCGCTGAAAG AAAAAACTTC TTACATGATT
GCAACAGGTG TCGGTTTGAT TCTTTTGGGA GTTTCACTAT TGATATTTTT GGCAACGCTG
GTGGAACGCA ATCTGATTTT TAAATTTCTT CCCCAGAATG CAAGAGAAGC TCTTCCTGTT
ATAGTGCTGT TTTTATTTAT AATTCCGGCG GTAATCCTCT TCATGTACAC GGAAAACAAA
CTTCAAAAGT TCAAGTTCAT TGAAGAGGGA AAATTTGAAA TCTCACCGGG TTTAAAAAAT
ATTTTAAACT CAGAACTGCC ATCTGTTACT CAAAAACAAA ATATTCCCAT CATCACGGGT
GTCAGCCTTT GCATACTCTC CGTCGTCGTT TTGCTTGTTT TTGGAATCTT TGAGTCTTTC
GCCGCTTTCG GAGTATCTAT CATGCTTTTA ATGATAGCCG CCGCAGTATT TATTTTTATA
ACAAGCACCA GTACCGCTGA AGCTTATAAA AAACTGATGA AAATTGACGA GTACAGTCCG
GAAAGGGTAA GACAGAATAA AGTCATTGGA GCCGTTGCCG GAGTCATCTG GCCAATTGCA
ACCGCCCTCT TTTTAATCGG TGGCTTTGTT TTCAAGCTTT GGAACATATG CTGGATTGTA
TTTCCGATAA CCGGAATACT CTTCGGAGGC TTTGCCGCAT TCTATAAAGC AATTAAGACA
GATAAATAA
 
Protein sequence
METIKNYLDN IFANLPKTKE MERLKSEIYY NMEEKYNELK KSGKPENEAI GIVISEFGNI 
DELLEEMGIS PSSNSENHPV IENEEAMEFI SLKEKTSYMI ATGVGLILLG VSLLIFLATL
VERNLIFKFL PQNAREALPV IVLFLFIIPA VILFMYTENK LQKFKFIEEG KFEISPGLKN
ILNSELPSVT QKQNIPIITG VSLCILSVVV LLVFGIFESF AAFGVSIMLL MIAAAVFIFI
TSTSTAEAYK KLMKIDEYSP ERVRQNKVIG AVAGVIWPIA TALFLIGGFV FKLWNICWIV
FPITGILFGG FAAFYKAIKT DK