Gene Swoo_4720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4720 
Symbol 
ID6119097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5697354 
End bp5698337 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content41% 
IMG OID641636302 
ProductXRE family transcriptional regulator 
Protein accessionYP_001763065 
Protein GI170729039 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTAG CGGAAAAGAT TATCAGGTTA AGAAAACAAC TAGGTTGGTC GCAGGAAGAA 
TTAGCCGAAA AAATGGCTAT ATCTCGACAG TCAGTATCTA AATGGGAGAG CGCTAATAGC
ATTCCAGATT TAAATAAAAT TATTAAACTG GCCGACATTT TTGAGGTTTC AACTGACTTC
CTACTTAAAG ATGAATATGA AGCTAATAGC TACAACGATG AACCTAAACC ATCAAACCTT
AATCAAGTCA GCTTAGAGCA AGCCACACAG TACGTTAACA GCAAAATACA GGAAGCAGCA
CTGATAACGA AAGGCGTTAT TTTATCTGTT TGCTCTGCCA TACCACTATT CTTCTTTCTG
GCAATGGCAG AGACCCAACG AATGGGTATA ACCGATGATG CAGCGACCAC TATCGGATTG
GTATGCGTGC TGATGTTAGT TGCAACAGCA GTCAGCTTTT TTATAAAAAC CAACCAATTT
AAAAATGAAA CCGCTGCGAT TGAAAACCAA GATTTTGAGC TAGCTTATGG CGTCCACAGT
ATTTTTAGTG AGCGACTAGC AGCATATCAA CCTAGGTATA ACCGCAGCTT ATTCATCGCC
ATTAGCCTGT TTATTTTCAG TTTTGTACCA TTGATAGTCG TTAACCAGTT TTTTGATACT
TCGGGAATGG TGCTAATGAT GATAGCCGTC CTACTGTTAA TGGTATCAGC AGGGCTATTT
TTCATCATCC CAGCATCAAC AAAGCTCGAT GCATATAACC ATATTCTGCA AGATAAGGGA
GCAGACACAG AGCAAACCAA ACGCAACAAG CGTGCAGAAA AACTAGCCGC TTTTTATTGG
CCATTATTAA TAGCAATCTT TCTAGGATGG AGCCTTTGGA CCATGGACTG GGGCACCACT
TGGATCATTT GGCCAGTAGG CGCAATACTC TTCGCCGCCT TAGTGGGTTT AATGGAATTG
CTAGAGAAGC CTCAAAACAA CTAA
 
Protein sequence
MILAEKIIRL RKQLGWSQEE LAEKMAISRQ SVSKWESANS IPDLNKIIKL ADIFEVSTDF 
LLKDEYEANS YNDEPKPSNL NQVSLEQATQ YVNSKIQEAA LITKGVILSV CSAIPLFFFL
AMAETQRMGI TDDAATTIGL VCVLMLVATA VSFFIKTNQF KNETAAIENQ DFELAYGVHS
IFSERLAAYQ PRYNRSLFIA ISLFIFSFVP LIVVNQFFDT SGMVLMMIAV LLLMVSAGLF
FIIPASTKLD AYNHILQDKG ADTEQTKRNK RAEKLAAFYW PLLIAIFLGW SLWTMDWGTT
WIIWPVGAIL FAALVGLMEL LEKPQNN