| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4720 |
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| Symbol | |
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| ID | 6119097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5697354 |
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| End bp | 5698337 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641636302 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001763065 |
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| Protein GI | 170729039 |
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| COG category | [K] Transcription |
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| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAG CGGAAAAGAT TATCAGGTTA AGAAAACAAC TAGGTTGGTC GCAGGAAGAA
TTAGCCGAAA AAATGGCTAT ATCTCGACAG TCAGTATCTA AATGGGAGAG CGCTAATAGC
ATTCCAGATT TAAATAAAAT TATTAAACTG GCCGACATTT TTGAGGTTTC AACTGACTTC
CTACTTAAAG ATGAATATGA AGCTAATAGC TACAACGATG AACCTAAACC ATCAAACCTT
AATCAAGTCA GCTTAGAGCA AGCCACACAG TACGTTAACA GCAAAATACA GGAAGCAGCA
CTGATAACGA AAGGCGTTAT TTTATCTGTT TGCTCTGCCA TACCACTATT CTTCTTTCTG
GCAATGGCAG AGACCCAACG AATGGGTATA ACCGATGATG CAGCGACCAC TATCGGATTG
GTATGCGTGC TGATGTTAGT TGCAACAGCA GTCAGCTTTT TTATAAAAAC CAACCAATTT
AAAAATGAAA CCGCTGCGAT TGAAAACCAA GATTTTGAGC TAGCTTATGG CGTCCACAGT
ATTTTTAGTG AGCGACTAGC AGCATATCAA CCTAGGTATA ACCGCAGCTT ATTCATCGCC
ATTAGCCTGT TTATTTTCAG TTTTGTACCA TTGATAGTCG TTAACCAGTT TTTTGATACT
TCGGGAATGG TGCTAATGAT GATAGCCGTC CTACTGTTAA TGGTATCAGC AGGGCTATTT
TTCATCATCC CAGCATCAAC AAAGCTCGAT GCATATAACC ATATTCTGCA AGATAAGGGA
GCAGACACAG AGCAAACCAA ACGCAACAAG CGTGCAGAAA AACTAGCCGC TTTTTATTGG
CCATTATTAA TAGCAATCTT TCTAGGATGG AGCCTTTGGA CCATGGACTG GGGCACCACT
TGGATCATTT GGCCAGTAGG CGCAATACTC TTCGCCGCCT TAGTGGGTTT AATGGAATTG
CTAGAGAAGC CTCAAAACAA CTAA
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| Protein sequence | MILAEKIIRL RKQLGWSQEE LAEKMAISRQ SVSKWESANS IPDLNKIIKL ADIFEVSTDF
LLKDEYEANS YNDEPKPSNL NQVSLEQATQ YVNSKIQEAA LITKGVILSV CSAIPLFFFL
AMAETQRMGI TDDAATTIGL VCVLMLVATA VSFFIKTNQF KNETAAIENQ DFELAYGVHS
IFSERLAAYQ PRYNRSLFIA ISLFIFSFVP LIVVNQFFDT SGMVLMMIAV LLLMVSAGLF
FIIPASTKLD AYNHILQDKG ADTEQTKRNK RAEKLAAFYW PLLIAIFLGW SLWTMDWGTT
WIIWPVGAIL FAALVGLMEL LEKPQNN
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