Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0230 |
Symbol | |
ID | 4438756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 266202 |
End bp | 266987 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639672090 |
Product | hypothetical protein |
Protein accession | YP_814077 |
Protein GI | 116628905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00373466 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 9.5849e-23 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATTATCA TGTCTAACGA AAATTATATA TCTTATTCTG CTACCCAAGA TTTCTTATCT GCCAGAAGAC GTAGTTCAAC ATTAATTGCT AGTGGCGTGA TGCTATGTAT TTTCTCACCA ATTGTCTTAT TACTTCTAAT TAGTTTTACT AGATTAGACA TCTTAACCTG GTCAATCAAT TTTGCAACTG GAATTGGAGT AATTGTTTTA CTAGCTTTTA TCGCCGCAGC AGTTGCGTTA TTCATAGCTG GAAACCGATG GCTTAAAGTT CATGAAAATT ACGAATATGA AGACTGCAAT CTTTCAAACA AATTAAGAGA AAAAATTATC AAAGAAAATA AAGTCTATGA AAACCAACAT ATGATTTTTA AAATTATTGG CATTACTTTT TGCATTTTGT CTGCTATTCC GTTAATGAGT GGCGCCTTAT TTGTAGATGC ACTTGCTAGC AGTAGACTTG ATGACTTAAT GACTGGCCTT TCTTCAGTTA CGCTTTTACT CGTTGGCATT GGCGTCTTTT TCTTAGTTAA AACTAATATC ATTCATGATA GTTTCAATAT TATCCTACAA CTTGATGACT ACACAAGTGA GAAAAAAGCT GGTAAAAAGT TGATTGAAAA ATACGCAACC ATTTACTGGA TGGTAATTTC TTTTATCTAT CTTGCTTATA GTTTTATGAG TAACAATTGG AGCCAGAGCT GGATTATTTG GCCGCTAGCT GGAATTGCGT ACGGAATCTT TGAAACGGTC ATGTCGCTAA AAAAGAAAAA AGCAATTTCA GAATGA
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Protein sequence | MIIMSNENYI SYSATQDFLS ARRRSSTLIA SGVMLCIFSP IVLLLLISFT RLDILTWSIN FATGIGVIVL LAFIAAAVAL FIAGNRWLKV HENYEYEDCN LSNKLREKII KENKVYENQH MIFKIIGITF CILSAIPLMS GALFVDALAS SRLDDLMTGL SSVTLLLVGI GVFFLVKTNI IHDSFNIILQ LDDYTSEKKA GKKLIEKYAT IYWMVISFIY LAYSFMSNNW SQSWIIWPLA GIAYGIFETV MSLKKKKAIS E
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