| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0869 |
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| Symbol | |
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| ID | 7272359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 896007 |
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| End bp | 896879 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643569515 |
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| Product | pentapeptide repeat protein |
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| Protein accession | YP_002465951 |
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| Protein GI | 219851519 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.236368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGA AATTGACAAA TTATTTGAAT GGCGTTTTTG CGCCGTACGA TGGGGTAAAA
AGCATCGATG AACTAAAGGC CGACCTGCTC TCTGATTTGC AGGAGCGGTT CCGTGAGCTC
ATAGCCGAGG GCAAGGACGA TAAAACGGCT TTTCAGATGA CTATCGACAG CATCGGCGAC
ATTGAGCAAA CGGTGCGGGA GGCCGCCGGC CTTTCCCGCT CGCTGGAGCG GCAGCTGTTG
ATCAACTTCA GCGCGAGCAA TTTGCTGAAG AGCGACTTCG CCGGAGTTAC AGCGCATAAA
GGAAAATTTG AAGCGAGCGC TTTGCGCGGC TCCGACTTTT CAGGCGCGGA CCTGACCGGC
AGCTTGTTTA AGGCTAGCGA TGTGGGCGAG GCGAATTTTG ACGGCGCAAA TCTCACAGAC
TGCACCTTTT CCACTCTTGA TCTGGCTGGT GCGAGCTTCC ATCAATCAAT CCTTGTGAGA
ACCAATTTCA GCATGTCGGA GCTGGCCGGA GCCAAATTCA TCGACGTAAA GCTGACTGAC
GTCAGCATAA CAATGAGCGA CCTGAGAAAA ACGATCTTTG AAAGCTGTAT TTTTAACGGC
GTTGACTTCA AATATTGCGA CCTGCGGGGC TTGTCCTTGG ACGGGCAGAC CTTTATCGGG
GTCAAGTTTG GCGAGGCGAT GCTGAACGAA GTTACGTTCA AGGGTGCGAC ACTTAAAAAT
GTGTCCTTTA CACCGCCGTT TTCCCTGACC AAGACCAAGA AATACTACAA TGCCATCAAG
ACCATCAGGT TTGACGGCTC GATGATGGAT AAACTGACCT ACAACTCCCT CAAAGGCATG
GGGGCCGATT TGTCAAAGGT TACTGTTATA TAA
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| Protein sequence | MNEKLTNYLN GVFAPYDGVK SIDELKADLL SDLQERFREL IAEGKDDKTA FQMTIDSIGD
IEQTVREAAG LSRSLERQLL INFSASNLLK SDFAGVTAHK GKFEASALRG SDFSGADLTG
SLFKASDVGE ANFDGANLTD CTFSTLDLAG ASFHQSILVR TNFSMSELAG AKFIDVKLTD
VSITMSDLRK TIFESCIFNG VDFKYCDLRG LSLDGQTFIG VKFGEAMLNE VTFKGATLKN
VSFTPPFSLT KTKKYYNAIK TIRFDGSMMD KLTYNSLKGM GADLSKVTVI
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