16 homologs were found in PanDaTox collection
for query gene CPR_2291 on replicon NC_008262
Organism: Clostridium perfringens SM101



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008262  CPR_2291  GntR family transcription regulator  100 
 
 		 69 aa  139  9.999999999999999e-33  Clostridium perfringens SM101  Bacteria  decreased coverage  0.000698422  n/a   
 
 
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NC_008261  CPF_2589  GntR family transcriptional regulator  95.59 
 
 		 206 aa  129  1.0000000000000001e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
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NC_008261  CPF_1615  TrkA domain-containing protein  51.47 
 
 		 208 aa  72.4  0.000000000002  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0410032  n/a   
 
 
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NC_008262  CPR_1361  TrkA domain-containing protein  51.47 
 
 		 208 aa  72.4  0.000000000002  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00515151  n/a   
 
 
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NC_008527  LACR_1543  GntR family transcriptional regulator  57.14 
 
 		 206 aa  70.9  0.000000000006  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0876912  n/a   
 
 
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NC_008531  LEUM_0356  GntR family transcriptional regulator  50 
 
 		 204 aa  66.2  0.0000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  1  n/a   
 
 
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NC_010001  Cphy_0117  TrkA domain-containing protein  49.18 
 
 		 214 aa  64.3  0.0000000005  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
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NC_010320  Teth514_1200  TrkA domain-containing protein  46.88 
 
 		 212 aa  63.9  0.0000000007  Thermoanaerobacter sp. X514  Bacteria  normal  0.228424  n/a   
 
 
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NC_011830  Dhaf_1338  transcriptional regulator, GntR family  50.88 
 
 		 201 aa  63.2  0.000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
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NC_004116  SAG1134  GntR family transcriptional regulator  44.44 
 
 		 213 aa  60.1  0.00000001  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.0000105089  n/a   
 
 
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NC_011898  Ccel_3335  TrkA-C domain protein  47.37 
 
 		 213 aa  57.8  0.00000005  Clostridium cellulolyticum H10  Bacteria  normal  0.611638  n/a   
 
 
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NC_007644  Moth_1689  GntR family transcriptional regulator  50.94 
 
 		 214 aa  55.5  0.0000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.248739  normal  0.372482 
 
 
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NC_009253  Dred_2149  regulatory protein GntR, HTH  49.06 
 
 		 215 aa  55.8  0.0000002  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
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NC_011080  SNSL254_A4397  putative regulatory protein  32.79 
 
 		 240 aa  40.4  0.009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
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NC_003910  CPS_0449  GntR family transcriptional regulator  29.51 
 
 		 119 aa  40  0.01  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
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NC_011083  SeHA_C4399  GntR family regulatory protein  32.79 
 
 		 240 aa  40  0.01  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
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