Gene SNSL254_A4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4397 
Symbol 
ID6485294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4270638 
End bp4271360 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID642739636 
Productputative regulatory protein 
Protein accessionYP_002043330 
Protein GI194444714 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGTTG ATAAAACGAG CTTTACTCCG CTTTATAAGC AACTATTTTT TATCATCTGT 
CAGCAGATCC AGAACGGGTC TTTGCCTTTG GGTAGCCAAC TACCGACGCA AAAAGAGATT 
GCCAGATCCT ACAACGTCTC GCTGATTGTG GTTAAACAGG CCTGGAGCGA ATTAATCAAT 
GCGGGCATTA TTTCGTCGCA GCGCGGGAGT GGTTCTGTAG TGTGCTCGGT ACCGGAAGGA 
GTGAGCTACG GGCACACGTT TCGCGGTATT ACCCGCGATC TCCAGGACGC CAGCGTGGCG 
ATTGAGAACC GTATTCTGGA AATCGCGCCG CGCCGCGCGC GCGACGCTCA GGCAGACGGC 
TTGAGCCTGC CCGCACAGCA TCACTATCTC TATATTTCGC GTATTCGTTG CCTGAATAAC 
CGCCCATTTA ACCATGAGAA AATATATCTC GATCTCAGCT TCTTTCCCGG CCTGGAACTG 
ACGCCGCAGG CGCTGGAGCA TACGTCGCTC TATTCGTTAT TAAACGTCAC AAGCGACTCG 
GCGATAGAAA AAGTTGAGGC GATTTTACCT TCCGCTGACC TGTGCGAAAA ATTGCAAATC 
GCCGCCAATA AACCGCTGTT ATCCGTCGCC AGACAGACGT TTCAGGCCGG GAAGGACAGC 
CCTTTTGAGT ATTGCCGCTA TTACGTGCTG TCTGAATACT TTGGTGAAAT TCATTATCAC 
TGA
 
Protein sequence
MQVDKTSFTP LYKQLFFIIC QQIQNGSLPL GSQLPTQKEI ARSYNVSLIV VKQAWSELIN 
AGIISSQRGS GSVVCSVPEG VSYGHTFRGI TRDLQDASVA IENRILEIAP RRARDAQADG 
LSLPAQHHYL YISRIRCLNN RPFNHEKIYL DLSFFPGLEL TPQALEHTSL YSLLNVTSDS 
AIEKVEAILP SADLCEKLQI AANKPLLSVA RQTFQAGKDS PFEYCRYYVL SEYFGEIHYH