Gene SeHA_C4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4399 
Symbol 
ID6491184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp4283403 
End bp4284125 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID642744482 
ProductGntR family regulatory protein 
Protein accessionYP_002048071 
Protein GI194449742 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGTTG ATAAAACGAG CTTTACTCCG CTTTATAAGC AACTATTTTT TATCATCTGT 
CAGCAGATCC AGAACGGGTC TTTGCCTTTA GGCAGCCAGC TGCCGACGCA AAAAGAGATT 
GCCAGATCCT ACAACGTCTC GCTGATTGTG GTTAAACAGG CCTGGAGCGA ATTAATCAAT 
GCGGGCATTA TTTCGTCGCA GCGCGGGAGT GGTTCTGTGG TGTGCTCGGT ACCGGAAGGC 
GTGAGCTACG GGCACACGTT TCGCGGTATT ACCCGCGATC TCCAGGACGC CAGCGTGGCG 
ATTGAGAACC GTATTCTGGA AATCGCGCCG CGCCGCGCGC GCGACGCTCA GGCAGACGGC 
TTGAGCCTGC CCGCACAGCA TCACTATCTC TATATTTCGC GTATTCGTTG CCTGAATAAC 
CGTCCGTTTA ACCATGAAAA GATCTATCTC GATCTTAGCT TCTTTCCCGA TCTGCAACTC 
ACACCGCAGG CGCTGGAGCA TACGTCGCTT TATTCGTTAT TAAACGTCAC AAGCGACTCG 
GCGATAGAAA AAGTTGAGGC GATTTTACCT TCCGCTGACC TGTGCGAAAA ATTGCAAATC 
GCCGCCAATA AACCGCTATT ATCCGTCGCC AGACAGACGT TTCAGGCCGG GAAGGACAGC 
CCTTTTGAGT ATTGCCGCTA TTACGTGCTG TCTGAATACT TTGGTGAAAT TCATTATCAC 
TGA
 
Protein sequence
MQVDKTSFTP LYKQLFFIIC QQIQNGSLPL GSQLPTQKEI ARSYNVSLIV VKQAWSELIN 
AGIISSQRGS GSVVCSVPEG VSYGHTFRGI TRDLQDASVA IENRILEIAP RRARDAQADG 
LSLPAQHHYL YISRIRCLNN RPFNHEKIYL DLSFFPDLQL TPQALEHTSL YSLLNVTSDS 
AIEKVEAILP SADLCEKLQI AANKPLLSVA RQTFQAGKDS PFEYCRYYVL SEYFGEIHYH