11 homologs were found in PanDaTox collection
for query gene CPR_0280 on replicon NC_008262
Organism: Clostridium perfringens SM101



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008261  CPF_0285  endo-beta-N-acetylglucosaminidase  97.57 
 
 		 1135 aa  1506    Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_0280  glycosy hydrolase family protein  100 
 
 		 740 aa  1524    Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_1714  glycoside hydrolase family protein  50.57 
 
 		 951 aa  717    Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_0197  endo-beta-N-acetylglucosaminidase D  48.65 
 
 		 927 aa  674    Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1016  glycoside hydrolase family protein  41.56 
 
 		 880 aa  508  9.999999999999999e-143  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1190  glycoside hydrolase family protein  38.87 
 
 		 807 aa  478  1e-133  Salinispora tropica CNB-440  Bacteria  normal  0.112997  normal  0.725074 
 
 
-
 
NC_009953  Sare_1083  glycoside hydrolase family protein  38.72 
 
 		 807 aa  475  1e-132  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00148049 
 
 
-
 
NC_013595  Sros_4999  Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  36.95 
 
 		 834 aa  464  1e-129  Streptosporangium roseum DSM 43021  Bacteria  normal  0.517089  normal  0.335211 
 
 
-
 
NC_008261  CPF_0815  glycosy hydrolase family protein  36.48 
 
 		 1127 aa  456  1e-127  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_0300  glycoside hydrolase family protein  30.8 
 
 		 592 aa  233  1e-59  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_0126  glycoside hydrolase family protein  29.2 
 
 		 586 aa  220  6e-56  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0534718  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>