| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1714 |
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| Symbol | |
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| ID | 5741465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 2106148 |
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| End bp | 2109003 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292814 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001558825 |
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| Protein GI | 160879857 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4724] Endo-beta-N-acetylglucosaminidase D |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AATATTATAA GTTTGTGTCA GTAGCCCTGA TTGCTACAAT GTTCGTTACC
GGCTGTAGCA AGAATTCTTC CGACATAAAG GATAATGCCA CAAACTCAGA AGCAGTTGTC
ACAGAGGCAG TACAAGTACC GGAGAAAGAG CAGGCACCGG AGGAAAATCA AGCACCAGGG
AAAATAGTTT ATAGGGTAAC ACCGGAATCA GAATCCGATA TGAAAATGAT GAATATACCA
AATGCTCCTT ATTGGTTCCC GGCAGAGCTG TTGGAATGGA ATCCGAAGGA AGCCAAAGAT
TTAGATTTGT ATGTATCGAA TGTTCCCCTG AAAAGTAGAG TAGATAAGAG TAAGCTAGTG
AAAAGTAATA AGACTCAGAT AGCAGATTTT AAAGTTGCTG CATTGTCCAT CATGAATTCC
AGGACAAGCG GAAATTCTCC GCATGGATTG AATCGCTTCA ATGCAAATAC ATTCTCCTAT
TGGCAATATG TAGACCAATT AGTATATTGG GGAGGTTCTG CTGGAGAAGG CCTCATTGTA
CCACCTACGG CAGATGTAAC GGAAGCAGCT CATACCAATG GTGTTCCTGT ATTAGGTACC
ATATTCTTAG CACCGGAAGC ATGGGGCGGT AAAATAGTAT GGTTAGATGA TTTCTTGAAG
ACCGATGAGA ATGGTCAATT TTTATTAGTG GATAAGTTAA TCGAAGTATG TACGGTACTT
GGCTTTGATG GCTGGTTCAT TAATCAAGAA ATGGGCGGAA CGAAGGAAGC TCCATTAACG
AAAGAACATG CTGATAAAAT GTTATCATTT GTACAGCAAT TTAATGAAAA GTCAGCAGGT
AAGTTCTCCT TCATATGGTA TGATTCAATG ACTGAAGAGG GCGAAATTGA TTATCAAAAT
GCTCTTACTG ATAAAAATGA TGCTTTCCTG GTTGATGGAA ATGGGAAAAA AGGTGCGGAC
AGCATGTTTT TAAATTTCTG GTGGGCAGCA CGTGAATTAG CAGACCAGGA GTTGTTAGTA
AAATCCAATG AAAAAGCGAA AGAAAAAGGA ATTAATCCTT ATGATCTTTA TGCAGGCATT
GATGTTCAGG CAAATGGTGT TATGACCCGA ATTAACTGGG ATTTATTCGA GAAGAATAAT
GTACCGCATA CATCCATAGG GTTATATTGT CCAAGCTGGA CCTATTTTGC AGCAGATAGT
TTAGATGCTT TCGAGAGATA TGAAAATCGT ATGTGGGTTA ATGAACATGG TAATCCAACG
ATTCCGACAG AGGTTTCACA ATATGACTGG CATGGTATTT CTACATATGC AATCGAAAAA
ACAGTTGTAA ATCAATTACC TTTCATCACA AATTTTAATA AAGGAAATGG ATATAACTTC
TTTGTAAATG GTGAGAAAAT CTCTTTACAG GATTGGAATA ACAGAAGTAT TACAGATGTT
ATGCCAACCT ACCGCTGGAT TTTAAATCAG GAAGAAGGTA ATAAATTAAA ACCGGGTATT
GATTATGCAG ATGCATATTA TGGCGGAAAC TCAATACGCT TATATGGTGC AATGGAAACT
GATAAAAAGT CTGAATTAAC ATTATATAGC TCTGATCTGG CAATTGGCGA TAAAACGAAG
GCCTATGCGA TGCTGAAAGC AAACTATAAA GTAAATGCAG AGTTAGTATT AGAATTAGAA
GATGGTTCCA AAGAATATAT CAAAGGGGAT AATACTCTAA ACACTGAATG GGCAAAAATA
GTGTTTGATC TATCTAAAGT AAAAGGAAAG ACTGTTAAAA AGATTGGCTT TAACTTTACC
TCTTCTAAAT CGGATATGAT TCTCATCAAT ATGGGTAATC TTACTATTTT TGAAGAAAAC
ACAGTGGCTC CAACGACTCC TGGTAATTTA AAGATTGCAT ATCAGCAATT TGATGATGAT
GGACTATTTG CAGGGGTTAA GCTAGCATGG GATGGCGCTT CTAATGTTAG ATATTATGAA
GTATATAAAA TTAATGACGA CGGAAGTAAA TCCTTTCAGG GAGCTACTAC AGCAAAAGCA
CATTACATGA ATGCTTTGGT CAGGGAGGAA GGAGAGAAGA AGTCAACCTT TGAAGTAATT
GCAGTAAATA ATATGCAGCA AAGAAGTCAA GGTACTACGG TAGTAATGGA ATGGCCGAAT
ATTAGTTTAC CGAAAGCAAA TATGAAGGCT TCTAAAACCT TAGTTGCTCC TGGGGAAGTA
GTAGAATTTA CAAGCTTATG TTCTCAAAAC ACTACAGGTT ATGAATGGTC CTTTGAGGGA
GCAGATCATG CTGCTTCAAC AGAACAGAAT CCAAAAGTGA CATATTCTAA GGAAGGCGTT
TATAATGTTA GCTTAGTTGC TAAGAATGGG GAAGGAACAG CCGAATATAA AGTGGATGGT
TTGATTGTAG TTCGTAGTGA TGCTTCCGGT GATATTCCTG TAGTTTCAGA AGGTAAGACC
ACAAGTGCTT CCGGTTATGT AAATGAAAAT GAAGCACCTA GGTTTGCAGT CGATGGAAAA
ACAAATACAA AGTGGTGTGC AACAGGTTCA GCACCACATG ATATTACCAT TGACCTTGGT
GAAAATAAAA TGGTTAGTGA AGTTTACATG GCTCATGCAG AAAAAGGAAA CGAAAGCTCT
GATATGAATA CTTCATGGTA TACCATTGAA ACTAGTCTAG ATGGAAAGAG CTTTGAACCT
GCCATTGAAG TTAAAAACAA TGCTTCGGCT GAAACATTAG ACGCATTTAA GCCAAGAGAG
GCACGTTATG TAAAAGTTAC AGTGATGAAA CCAACACAAG GTTCCGATAC CGCTGTTCGT
ATTTATGAAA TTCAAGTTCA TGGGCTAGAT AAATAA
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| Protein sequence | MKKQYYKFVS VALIATMFVT GCSKNSSDIK DNATNSEAVV TEAVQVPEKE QAPEENQAPG
KIVYRVTPES ESDMKMMNIP NAPYWFPAEL LEWNPKEAKD LDLYVSNVPL KSRVDKSKLV
KSNKTQIADF KVAALSIMNS RTSGNSPHGL NRFNANTFSY WQYVDQLVYW GGSAGEGLIV
PPTADVTEAA HTNGVPVLGT IFLAPEAWGG KIVWLDDFLK TDENGQFLLV DKLIEVCTVL
GFDGWFINQE MGGTKEAPLT KEHADKMLSF VQQFNEKSAG KFSFIWYDSM TEEGEIDYQN
ALTDKNDAFL VDGNGKKGAD SMFLNFWWAA RELADQELLV KSNEKAKEKG INPYDLYAGI
DVQANGVMTR INWDLFEKNN VPHTSIGLYC PSWTYFAADS LDAFERYENR MWVNEHGNPT
IPTEVSQYDW HGISTYAIEK TVVNQLPFIT NFNKGNGYNF FVNGEKISLQ DWNNRSITDV
MPTYRWILNQ EEGNKLKPGI DYADAYYGGN SIRLYGAMET DKKSELTLYS SDLAIGDKTK
AYAMLKANYK VNAELVLELE DGSKEYIKGD NTLNTEWAKI VFDLSKVKGK TVKKIGFNFT
SSKSDMILIN MGNLTIFEEN TVAPTTPGNL KIAYQQFDDD GLFAGVKLAW DGASNVRYYE
VYKINDDGSK SFQGATTAKA HYMNALVREE GEKKSTFEVI AVNNMQQRSQ GTTVVMEWPN
ISLPKANMKA SKTLVAPGEV VEFTSLCSQN TTGYEWSFEG ADHAASTEQN PKVTYSKEGV
YNVSLVAKNG EGTAEYKVDG LIVVRSDASG DIPVVSEGKT TSASGYVNEN EAPRFAVDGK
TNTKWCATGS APHDITIDLG ENKMVSEVYM AHAEKGNESS DMNTSWYTIE TSLDGKSFEP
AIEVKNNASA ETLDAFKPRE ARYVKVTVMK PTQGSDTAVR IYEIQVHGLD K
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