| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0280 |
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| Symbol | |
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| ID | 4205309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 337838 |
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| End bp | 340060 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642564837 |
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| Product | glycosy hydrolase family protein |
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| Protein accession | YP_697609 |
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| Protein GI | 110803187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4724] Endo-beta-N-acetylglucosaminidase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACA AACAAAAAAT ACGTAAACGT AGAAGGGCTT TACTTTGTGT TTTTGCAGCA
TTTGCATTTT CTTTTAATCC TTTAGGAAAG ATAGCTTACG CAACACCTAA ACAAGATACA
AGTGTTGTAA ATTATGTGAA AACTCAAGAA GAAACTTCAA ACTCAATCCA GAATCAACCA
ATCTCATCTT ATTGGTATCC AGAAGATTTA TTAAAATGGA GTGCTAACAA TGATAAAGAT
GCAAAATTTA ATAAAAGCAC AGTTCCATTA GCAAAAAGAG TCGAAAAAGA TAAACTTGAC
ACTATTAATG ATACTCAAAA TAAAGATGTT AAAGTTGTAG CAATTTCAAT AATGAATGCT
AACACTAGTG GTAATCCATC ACAAGGCTCA AATAAATTTA GTGCTAATAC ATTCTCTTAT
TGGCAATACA TAGATAAATT GGTTTACTGG GGTGGATCAG CTGGAGAAGG ATTAATAGTT
CCTCCAAGTC CAGATGTTAC TGACTCAGCA CACAGAAATG GGGTTCCTGT TTTAGGTACT
GTATTCTTTC CTATGACAGC TCATGGTGGA AAAATGGAAT GGTTAAATAA ATTCCTTGAA
AAAGATTCTA ATGGAAACTT CCCTATAATA GATAAGTTAA TTGAAGTTGC AGAAAACTAT
GGCTTTGATG GTTGGTTCAT AAATCAAGAA ACAGAAGGAA CTGAACAAGA ACCTTTAACT
CCTGAACATG CTAAGCTTAT GCAAGAATTA ATAAGGCAAT TTAAAGCTAA GTCTAACGGA
AAATTTGAAA TCATGTGGTA TGATTCCATG ACAAAAGATG GGAATATGGA TTGGCAAAAT
GCTTTAACTG ATAAAAATGA ATATTTCTTA TTAGATGGAG ATAAAAACAA AGTTGCTGAT
AGTATGTTCT TAAATTTCTG GTGGACATAT AATAGTTTAA AAGATAAAGA TTTATTAAAA
GTATCTAATG AAAAAGCTAA AGAAATAGGA ATAAACCCTT ATGACTTATA TGCTGGAATA
GATGTTCAAG AAAATGGATA TAAAACTCCT CTTAGATGGA CTCATTATCA AAGAGATGAC
CAAGCTCCAT TTACTTCATT AGGTTTATAT TGTCCAAGTT GGACTTATTT TGATGCTAAA
ACACAGGAAC AATTCCAAGA AAATGAAAGT AGATTATGGG TTAATGAACA TGGTGATCCA
TCAAAGGCAA CTAATGCTCA AGGAGTTGAT TGGAGAGGAA TTTCAACATA CTCTGTTGAA
AAAAGTGCTG TAACTAGCCT TCCATTTACA ACTAACTTTA ATATGGGGAA TGGATATGAT
TTTTATGTTG ATGGTAATAA AGTATCTACT CAAGATTGGA ATAACAGAAG TTTAAACGAT
ATAATGCCAA CTTACAGATG GGTTATTTCA AATGAAGAAA ATAATAATGT AAAAGCTGAC
ATAGATTATA CTACTGCTTA CTATGGTGGT AACTCAATTA AACTTTCTGG TTACCTAGCT
GAAGGAAAAG CTTCTACAAT AAAACTTTAT AGTTCTGATT TAACTTTACC TGAAGGTGTG
CAATTCACTA CTACTGCTAA GGCTAATGGA AATACTGTAG ATATGGATTT AGTTCTTACA
TTCCATGATG GTACAGAAAC TACTATTTCT GCTGATAAGA AACTTAGTAC TGATTGGACT
AAACTTACTT ATGATATTTC ACCATATGTA GGAAAATCAA TTAAAACTAT TTCTTATAAA
CTTTCAAGCC CAGTATGTGT TGATAACTTC TTAGCAAACT TAGGTAATAT AACAATAGAA
ATTCCTAACT CAAGTTCAAA AGTAAATATA TCTAATGCTA AATTAAATGA TGTTGACTTT
AAAGATGGAA TATATGCAGG AGCTAGACTT TCATGGAGTC CTGAAGGAAA TTCTTCTGAT
GTACATCATT ATGAAATTTA CAGAGTTATG AATGATGGAA CTAAAGTTTT ACTAGGTGCA
ACTCCTAATA CAAGTTATTA TGTTAGTGAT TTAAGAAGAA ATGATAAAGA AACAAATACT
AATTTTGAGG TAGTTGCTGT TAATAAAAAC TATAACAGAG GAAATAGTCA AAGTATAAAT
ATAGAATGGC CTTCTTACCC TTCTCCAGCA GCATCGTTTA AGGTTTCAAA TACACTAATA
GCACCAGGAC AATCAGTAAC TTTTACTAAC ACTAGTTCTG AAGTTACAGA AGAAATCCAA
TGA
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| Protein sequence | MTNKQKIRKR RRALLCVFAA FAFSFNPLGK IAYATPKQDT SVVNYVKTQE ETSNSIQNQP
ISSYWYPEDL LKWSANNDKD AKFNKSTVPL AKRVEKDKLD TINDTQNKDV KVVAISIMNA
NTSGNPSQGS NKFSANTFSY WQYIDKLVYW GGSAGEGLIV PPSPDVTDSA HRNGVPVLGT
VFFPMTAHGG KMEWLNKFLE KDSNGNFPII DKLIEVAENY GFDGWFINQE TEGTEQEPLT
PEHAKLMQEL IRQFKAKSNG KFEIMWYDSM TKDGNMDWQN ALTDKNEYFL LDGDKNKVAD
SMFLNFWWTY NSLKDKDLLK VSNEKAKEIG INPYDLYAGI DVQENGYKTP LRWTHYQRDD
QAPFTSLGLY CPSWTYFDAK TQEQFQENES RLWVNEHGDP SKATNAQGVD WRGISTYSVE
KSAVTSLPFT TNFNMGNGYD FYVDGNKVST QDWNNRSLND IMPTYRWVIS NEENNNVKAD
IDYTTAYYGG NSIKLSGYLA EGKASTIKLY SSDLTLPEGV QFTTTAKANG NTVDMDLVLT
FHDGTETTIS ADKKLSTDWT KLTYDISPYV GKSIKTISYK LSSPVCVDNF LANLGNITIE
IPNSSSKVNI SNAKLNDVDF KDGIYAGARL SWSPEGNSSD VHHYEIYRVM NDGTKVLLGA
TPNTSYYVSD LRRNDKETNT NFEVVAVNKN YNRGNSQSIN IEWPSYPSPA ASFKVSNTLI
APGQSVTFTN TSSEVTEEIQ
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