| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4999 |
|---|
| Symbol | |
|---|
| ID | 8668293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5522691 |
|---|
| End bp | 5525195 |
|---|
| Gene Length | 2505 bp |
|---|
| Protein Length | 834 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase |
|---|
| Protein accession | YP_003340541 |
|---|
| Protein GI | 271966345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.517089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.335211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCC GCGTGTTACC CGCCCTGTGC GGGGCCCTGA TCGCTACGGC CCTCGCCGTC
CAGCCCGCCC TCGCCGCCCC CACGGCCCGG CCCACCTCCT CACCCGCCGA CCCATCCCCC
TCGGCTGCTC CGTCCACCCC GGCGGCGCCG AACCGGTCGG GCCGCACGGC GGTGCGGGCG
GCGGGCGACC AGCCCTACGC CTCCTACTGG CACCCGAACA CGATCCTGAA CTGGGACCCG
GCGACGGACC CGGACGCGCG GTTCAACCGG TCGCGGGTAC CGCTGCGGCC CCGCGCCTCC
GACCCCGCGC TCAAGGCCAA CCCGAACGCG CGCGCCGGCG AGGGCAAGAT CGCCTCGCTG
GTGTCGTTCG CACCCACCTC CGGCAACCCG TCACAGGGCT CCCTCGACCC CAACTACTAC
GCCTTCACCT ACTGGCAGTA CATCGACACC CTGGTCTTCT GGGGCGGTTC GGCGGGCGAG
GGCCTCATCC TCGCCCCCAA CGCGACGGTG ATCGACGCCG CGCACCGCAA CGGGGTCAAG
GTCTACGGCA CGGTGTTCTT CCCGCCCACG GCGTACGGCG GGCAGATCCA GTGGGTACGC
GACTTCGTGC GGAAGTCCGG CCCGAACTAC CCGGTCGCTG ACAAGCTGGT ACAGGTGGCC
CAGCACTACG GGTTCGACGG CTGGTTCATC AACCAGGAGA CCGCGGGCGG CGACGCCGCC
CTGGCGACCG AGATCCGTTC GCTGATGAAG TACGCCCGGG CCAAGAGCCA GGCCGAGTTC
ATGTGGTACG ACGCGATGAC CGAGAACGGC TCGGTGAGCT GGCAGGACGC GCTCACCACG
GCGAACGACG CCTTCCTGAG CGACCCCGCC CGGGTGTCCG ACTCGATGTT CCTGGACTTC
GGCTGGGGCG CGGGCAACCT GCGCTCGTCG CGCGACCTGG CCCGCTCCCT CAGCCGGGAC
GAGCACGAGC TGTATGCGGG CATCGACACC GAGGCCAACG GATACAACAC CGGGGTGAGC
TGGGACGCGG TGTTCCCCAC CGGTCAGCCG CACGTCACCT CGCTGGGCAT CTACCGGCCC
GAGTGGACGT GGAAGTCCTC CTCAGGCCCG GCCGACTTCC GCACCCGCGA CTCCCGGTAC
TGGGTGGGCG CGAACGCCGA CCCGTCCAAC ACCGCGACCT CCTCGTCCTG GAAGGGCCTG
GCGCACCACA TCGCCGAGTC CACGGCCGTG ACCGCGAAGC CGTTCGTCAC CGGGTTCAAC
ACCGGCCACG GCGACTTCTA CAACGTCGGC GGGACCCGCG TGCGCACCGG CGGCTGGAAC
AACCTGTCAG TACAGGACGT GCCCCCCACC TATCAGTGGG TGGTGGACTC CAGCGGGACC
CGGCTCACGC CATCCATCGA CTACGGCGAC GCGTACGAGG GCGGCTCGTC GCTGCGGCTC
ACCGGGAATC TCGACGCAGC CAACACCGTG CGGCTCTACC AGGCGAAGCT GCCGGTGACG
GCCGGCACCA AGCTGTCCGT CGTGGTCAAG ACGCCCGCCG CGGGTCCGAC CCGCCTGAAG
GCGGCCGTCG CGTTCACCGA CGCGCCGGGT ACCTTCACCA CATTCGACCT GGGGTCCACG
AGCGGCACCG GCTGGGAGCG GAAGACGCTG GATCTGTCGG CGCACGCCGG CAAGACCATC
GCCCAGCTCG GCCTGCGCGC CGAGGGCTCC GCCGCCTCCT ACGACATCCG GGTCGGGCAG
CTCGCCGTGT ACGACGGAGC CGTGGACGCG CCCGCCGCGC CCTCCGGCCT CCAGGTGCTC
GGCGCGACCG ACGTGTCCCC CTCGCGCAAG TCGCTCCGCC TGGCCTGGAC CGCCGCCGGC
TCCGGGTCCG GCCAGGTCCA CCACTACGAC GTCTACCGCC GCAACGCCGA CGGCTCCCGG
ACCTACCTGG GCGCGACCCC GAACGACGCG TACTTCGTGC CGCAGCTCGA CCGGGCCGGC
GCGGAGACCA GCACGACGAT CGAGGTCGAG GCCGTCTCCA CCGAGTACGG CCGGTCGGCC
GCCGCGACCG CGACGGTCGC CTGGTCGGGG GAGCCGGGGG AGGACAATCG CGCGCTCGGC
CGCCCGGCAA CCGCCTCCGG GCAGTGCAAC GCGAACGAGG GGCCGGCCAA GGCCGTGAAC
GGCACCGTCA CCGGCGGCAA CTCCGACAAA TGGTGCACGC TCACCGCGAA CAGGTGGCTG
GAGGTGGACC TCGGCGAGGC CCGCTCCCTG ACCCGGTTCG TGGTCCGGCA CGCGCAGGCC
GGCGGGGAGC CCGCCGCGTT CAACACCCGG GACTTCACGA TCCAGGTGCG CTCCGCCGCC
TCGGAGGAGT GGGAGACCGC GGTGACCGTC ACCGGCAACA CGACGGCCAC CACCACTCAC
CCGGTCACCC TCACCGCCCG CCACGTCAGG CTGTCCATCA CCAAACCGGC TCAGAACACC
GACTCCGCCG CCCGGATCTA CGAGTTCGAG GCGTGGGGGA GGTAG
|
|---|
| Protein sequence | MRRRVLPALC GALIATALAV QPALAAPTAR PTSSPADPSP SAAPSTPAAP NRSGRTAVRA
AGDQPYASYW HPNTILNWDP ATDPDARFNR SRVPLRPRAS DPALKANPNA RAGEGKIASL
VSFAPTSGNP SQGSLDPNYY AFTYWQYIDT LVFWGGSAGE GLILAPNATV IDAAHRNGVK
VYGTVFFPPT AYGGQIQWVR DFVRKSGPNY PVADKLVQVA QHYGFDGWFI NQETAGGDAA
LATEIRSLMK YARAKSQAEF MWYDAMTENG SVSWQDALTT ANDAFLSDPA RVSDSMFLDF
GWGAGNLRSS RDLARSLSRD EHELYAGIDT EANGYNTGVS WDAVFPTGQP HVTSLGIYRP
EWTWKSSSGP ADFRTRDSRY WVGANADPSN TATSSSWKGL AHHIAESTAV TAKPFVTGFN
TGHGDFYNVG GTRVRTGGWN NLSVQDVPPT YQWVVDSSGT RLTPSIDYGD AYEGGSSLRL
TGNLDAANTV RLYQAKLPVT AGTKLSVVVK TPAAGPTRLK AAVAFTDAPG TFTTFDLGST
SGTGWERKTL DLSAHAGKTI AQLGLRAEGS AASYDIRVGQ LAVYDGAVDA PAAPSGLQVL
GATDVSPSRK SLRLAWTAAG SGSGQVHHYD VYRRNADGSR TYLGATPNDA YFVPQLDRAG
AETSTTIEVE AVSTEYGRSA AATATVAWSG EPGEDNRALG RPATASGQCN ANEGPAKAVN
GTVTGGNSDK WCTLTANRWL EVDLGEARSL TRFVVRHAQA GGEPAAFNTR DFTIQVRSAA
SEEWETAVTV TGNTTATTTH PVTLTARHVR LSITKPAQNT DSAARIYEFE AWGR
|
|---|
| |