13 homologs were found in PanDaTox collection
for query gene TM1040_1611 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008044  TM1040_0819  tape measure domain-containing protein  94.12 
 
 		 1451 aa  1510    Ruegeria sp. TM1040  Bacteria  normal  0.060992  normal  0.0141632 
 
 
-
 
NC_008044  TM1040_1611  hypothetical protein  100 
 
 		 1507 aa  2997    Ruegeria sp. TM1040  Bacteria  normal  0.405784  normal  1 
 
 
-
 
NC_008044  TM1040_1657  hypothetical protein  97.74 
 
 		 1508 aa  2751    Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007494  RSP_3791  hypothetical protein  28.34 
 
 		 1724 aa  171  1e-40  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3368  hypothetical protein  29.67 
 
 		 1724 aa  160  2e-37  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_2059  phage tail tape measure protein  32.2 
 
 		 1673 aa  151  9e-35  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3328  hypothetical protein  31.65 
 
 		 1632 aa  133  3e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.053568 
 
 
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NC_007493  RSP_1636  lambda family phage tail tape measure protein  31.57 
 
 		 1668 aa  131  9.000000000000001e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1782  prophage tail length tape measure  27.72 
 
 		 1835 aa  98.2  1e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_1628  prophage tail length tape measure  23.69 
 
 		 1906 aa  95.9  5e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  0.937522  normal  0.73173 
 
 
-
 
NC_008687  Pden_3596  phage tape measure protein  76.32 
 
 		 632 aa  71.2  0.0000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.0625908  normal  1 
 
 
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NC_010681  Bphyt_1180  Prophage tail length tape measure  34.38 
 
 		 1707 aa  57.4  0.000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.537045  normal  1 
 
 
-
 
NC_011894  Mnod_5056  hypothetical protein  33.01 
 
 		 1353 aa  45.4  0.008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
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