| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1180 |
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| Symbol | |
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| ID | 6283827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1318123 |
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| End bp | 1323246 |
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| Gene Length | 5124 bp |
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| Protein Length | 1707 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620740 |
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| Product | Prophage tail length tape measure |
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| Protein accession | YP_001894820 |
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| Protein GI | 187923178 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.537045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGCTT CGGCCGGAGC TATTAATGTC ACCCTGACGC TCGATTCGAC GCAGTATCTG
GCCGAGCTGA CCGAAAGCCA GAACCGGACG GTCACGACCG CCGCGCAGAT TGGCGCGGCA
CTGTCGGCGG GTTCGTTTGG CGCGAAGGAT CTGGCCGCTG CGATGCAGGC GGCGAGTGCA
TCCGGCGCAG GACTCGCCAG CAGCACGACG CTGCTGGCTG ATGCCGAGGC GCAGGCCGCT
GCGCGCATCA GGGACATGGT TGCGCGCTCG CTCGAGGCGC AGCAGGCGAT GGTCCAGTTG
TCTGCCGCGT CGCAGAGTGC CGCGAGCAGC GCTAACACGA TGGGCGCATC GGCAGACCAG
GTGCGCGCCA ACGTTACAGC GCAAACGCAG TCCATGATCG ACGCGCAGCG CGCGACCGTC
GCGATGAATG ACGAAATGCA GGCGTTGAGG TCGACGCTTG CACAAGGTGG TTCGAGCTTC
GCGACCATCG GCGACCAATA TGCGCGTCTC GATCGCGCGA TGGCGACGGG CAAGCTGTCG
ATGCAGGAAT ACGATGCCGC GCTTGCTGCC ATCGGCAAGG ATGAGGATGC GCGATCGAAG
TCGCTCGCGG CGCTGACTGC GAAGTACGAT CCGCTCGGCG CGGCCACACG AAGACTTGAG
GCCGATCAGG CGCTGCTCGA AGATGCTTTC AAATCGGGCG CAGTTTCTGC GGCGGATTAC
GAGCGTGCGC TGAACGGCAT CAAGGCGGAT CAGGCGAGCA TTGGTCTTCG CCAACTTGCC
CAGCAGGAGG CGCAGCTCGA GGCGTCGTTC CGCTCGGGCG CACTGGCCTC GGCGGATTTC
AGGCGGGCAA TGGCGGACAT TGCGACCAGT CGTCAGGCGC TGACGTCGGT CGCGACCGGT
GCGCAGGCAG CCGGCGCCGC CGTCGAAGGC TTCGGTCTGA AGACAGCGGG CGCGCGCAGG
GAAGTGATCG TGCTGGCTCA TGAAGCTGCG ACCGGTAGCT GGAGCAACTT CGGCGGATCG
CTGATGGTGC TCGCCGAGCG GATGGACCTG ATGGAGGTCG CAACCTCCGG CGCAGGGCTC
GCGGTCGCCG CGATCGCGGC GCCGATCCTG CTGGCCGGTG CAGCGATGTA CAAGGTGTCC
GAACAGAACG CCGCGATGAA CGAGGCGCTC GTCCTGACCG GTGATTATGC GGGCGTCACG
ACGGAGGAAC TGCGCGGCAT GGCACAGGCC GCGACGGCGG GTGGAGCGAC CTTCGACACG
GCTGCGGAGG CCGTGACGGC GCTGGCGGCA ACCGGACGGC TCACCGGGCA GGAAATCGCC
GACCTCGGGC GGACGACGGC CGATGCGGCG ACGTACACGT CGATTTCGGT CAAGCAGATG
GTGGACGACT TCACCAGGCT CGCGGAAGAC CCGGTGAAAG CGTCAGTTGC GCTGAACGAC
CAGTATCACT ATCTGACCGC GTCGACGTAC GACCAGATCG CGGCGCTCGA AAAGCAGGGT
GATGCGACCG GCGCTGCACA GATTGCCGTC GAGGCGTTCT CGAAGGCGAT GGACGAGCGC
ACGGGCGAGA TCGCGAGGAA CGAGGGCATC ATTCTCGCCG GCTGGCGGGA TATCAAAAGC
ATGATCAACG GCGCGATCGA GGCCGTCGGT TCGTTCGGCG CGACCGCCGG GCCGGCTGAG
GTCGTTGCAC GCATGCTGGC CAACAAACAG GCGCGGAATC CGCTCGGCAC GTGGGATGCC
GACGACGAAG CCGATCTGCA GAAGGCGATT GCGGCGCGCG ATGCAGCCGT GAAGACCGCC
CGCGACAAGG CGTCGCAAAG TGAGCAACAG CAGCAGCTGA TCGACGCGAA GCGGTGGTAT
GCAACGTGGA ACGAGCAGTT TGCAACGCCG GCCGAAAAGC GCGTCAAGGC GGTCAATGAG
TATCTGGACA AGACGGCTGC GCTGAATCTG AGCCCGGAGC AGCAGCTTGC CGACGAACAG
AAGATCAACG ACAAGGACAA GGATAAGACC GGCCGCAAAG GCGGCACGGG GCTCGTCGAT
CGCGCCGAGC TCACTGGCGA AGTGCAGGCC GTGAAAGATG CGCTTGCACA GGAACTGTCG
GCGGTGGACG GTGCGCGCAA GGTGCTCGAC TCGCAGTACA AGGGCGGTGC GCTGTCGATC
ACCGACTATT ACACGCTGGA TCGCAATCTG CTTGCCCAGG CCGCGACCGA TCATATCGAC
GCCGCGACTA AGGAAGCCGC CCTGATCGTG CAGGGCATGA ACAACCGGAA CCTGAGTGCC
GTACAGCGTG CGCAGCTCGC CAATCAGGAA CGCAAGGCTC TTGCTGACGG CGGCAAGGCC
GTCGAGGACT TCTTCCAGAA GGTCGCGCAG TCGGCCGCGC AGGAAGACGA GGTGTGGGAC
AAATACGGCA AGTCCCAGCT CGACGCAATG CAGAAGCAGA TCGACTCGGC GAACCAGCAG
CAGCAGTCGC TGCGGGACCA GATCGACACC TTCGGCATGA CGAAGGCCGC GATTGATGAC
CTGAAGGCAT CGCGTGCTGA CGACACGGTC GCCGCGCTCG AGCAGGGACG CGCAATTGCG
CTGCTGCAGG GCAATCTTGC TGATACGAAG TCGTGGGACG AAGCGATCGC GAAAGCAAAG
TCACTTTCGA ACGCGTTGCA TGGCGTCGCC AGCGACCAGG CAACGCTGGA CGATCTTGCG
CAGGCAAAGA AACAGCAGGA CGACCTGGTT AAGAGCTGGC AGAGCACGAT TGATGGCATC
GGGACCGACT TTCACAACGG CTTCCTGCAG ATGCTCACGG ACGGCAAAAA CGGCTGGTCG
AGCTTCACGA AGTCTCTGAA GAACACCTTT GAGACGACGG TTGTCGATGA GCTGTACAAG
TCGTTTGCAA AACCTTTCGT CGTCAGCGTG ATTGCGCAGA TTGCCGGCAT TGCCGGCGGC
AGTGGAGTGC AGAACTCGAT CCTGCAGAAC AACGGAATGG GCGGCGGAAA CGGTACGCTG
AACAACCTGC TGTCGAATCC GTACGGCACG TACAACAACC TGTCCAACGG CTATAACACC
GTGATGGGGT GGATTCAGGG ATACGGTGGT GCATCTACCG CGCTCGGTGC GTCGGCGATC
GCAGGCGCAA GCACGGGTGC ATTGTCGGGC GGCGGTGTCC TGCTGGGCGG GCTGGGTGGG
GGGATCGGTG GAGACGTGGC AGCAAGCGCC GGCGGCTATG CGTCTGCGCT CGGCTCCAAT
GCCTATGGAT TCACGGCAGG CGAGGCGGGT AGCGGCCTTG GTAGCACGCT TGGATCGTCC
GGAGGGCTGA TGTACGGCGG CGCCGGCCTG CTCGGCGGCC TCGCTGGTGG CGCTCTGTTC
GGGAACAAGG GGTATTCGAA CCTTGGTGGA TCCCTTGGCG CGATGGGCGG TCTGGCAATC
GGTGCGTCGT CGGCCGTGGC GGGCACTGCA ATCGGTGCGT CACTGGGCTC ACTGGCCGGG
CCGATCGGCG CCGTTGTCGG GATGGTATTG GGCTCGCTGG TCGGCTCTTT CATCGGTGGC
GGGGAAACCC GCTATGGCGC CGACTATACG ATCGACAGCA ACGACAACAT CACCAAGGTG
CGCGGCCCGT CCGGAGGAGA CCCGGCAGCA ACGGATGTTC AGGCCTCGAT CAAAAACACG
TATGACTCGA TAAAGTCACT GGCCTCGCAA CTGGGCGGAT CGATCGACGG GTTGGGGCAG
TATTCCGCGA CGTACGAAAT CAGCCCGAAG AAAGGCAATT CGTTCGTGGC GGCCGGTTTC
GGTGATCTGA ACACCGACGT CAACCGTCAG GATCTGAATG GCGTCAAGGA TTCGACGACA
GTGCTGAACG ACTTCAGCCT GCAGTTGCAG CGCTCCGTTA TCGACTCCCT GCAGAAGGCG
AATCTGGACA CGCCATATGC CGCTGTACTG CAGGGCGTCG ACGCGTCGAA GCTGTCGGCC
GATGACATCA CCTCGTTGCT GAGCGAGCTT AATTCGTTGA AGTCGCTGTT CGACTCCATC
CAGAAAATGG GCGACGACTT CACCAATCTC AAGAACGCCT CGGTCGATGC GCAAACGGCG
GTGCTGAGTC TGGCTGGTGG TGTGGACTCG TTTAACACGA GCGCGACGTA CTTCTATCAG
CATTTCACGT CGGCAGCCCA GCAGGCCAAT GACGCGTCGA AGTCCGTGAC GGATCAGCTG
GCCGCGCTCG GCTATAGCGG TATTCACACG CGGGATCAGT TCCGGAATCT TGTCGAGTCT
CTCGACCTGT CGACGGCGGC GGGACAGCAG GCCTATGTCT CGCTGCTTGC GCTGGCGCCC
GCGTTCGACA ATGTCGTCAG TTCATACGAG TCCGCGGTGG CCTCCGCGTA CAGCACCCAG
TCGCAGGCGT TGCAATCGTT CAGGGATCAG GTCGACCAGT TTCGCCAGTC ACTCACAACG
GGCGACCTTT CGACCGCGTC ACCGGAGCAG CAATACGCAG AGACCCGCCA GCGCTTCGAG
GATCTGTACG GCAAGGCGAT CGGCGGGGAC GCCACCGCAC AAGCCGGCCT CACCTCGGCA
GCGCAGGATT TCCTCAATGC GTCGAAGGCG TACAACGCGA GTTCGGGCCA GTATCAATCC
GACCTTGCGG AAGTCATGCA GTCGATGGAC TACGCCAGCT CGTCGGCCGA CGCCCAGCTC
GATCAGTTGA AGGAGATGGT GAAGGGCATC GTCGATGTGA ACACGTCGGT GCAAACCGTG
GCCGAAGCGA TCGCAAGTCT GCAGGCATGG ACGTCGGTCA ACGGCTCGCA TGCGTCGGGT
CTGTACCGTG TGCCGTTCGA CGGCTATATC GCTGAACTGC ATGCGGGGGA ACGGGTACTC
ACCGCCAATG AAGCACGGTC GCTCGATGCG CGATTGCCCA CAATGCAAAC GGTCGATTTC
ACGCGATACC GGTCGAGCGC CAACGATCCG CTGCTGCAGG AGTTGAAGGC ATTGCGGGAG
CAGAACGCGA AGCAGGCGGA GGCGATCGCA AAGTTACTTG CCGCGCAGCT CCAGCAGGCC
GACGCGATTG CGCGTGACGG ATCGGAAAAG ATGGATCAGC AGACGGCGGT GCTGCAACAG
CAAAGGAGGC CAGGCCAGCA ATGA
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| Protein sequence | MGASAGAINV TLTLDSTQYL AELTESQNRT VTTAAQIGAA LSAGSFGAKD LAAAMQAASA
SGAGLASSTT LLADAEAQAA ARIRDMVARS LEAQQAMVQL SAASQSAASS ANTMGASADQ
VRANVTAQTQ SMIDAQRATV AMNDEMQALR STLAQGGSSF ATIGDQYARL DRAMATGKLS
MQEYDAALAA IGKDEDARSK SLAALTAKYD PLGAATRRLE ADQALLEDAF KSGAVSAADY
ERALNGIKAD QASIGLRQLA QQEAQLEASF RSGALASADF RRAMADIATS RQALTSVATG
AQAAGAAVEG FGLKTAGARR EVIVLAHEAA TGSWSNFGGS LMVLAERMDL MEVATSGAGL
AVAAIAAPIL LAGAAMYKVS EQNAAMNEAL VLTGDYAGVT TEELRGMAQA ATAGGATFDT
AAEAVTALAA TGRLTGQEIA DLGRTTADAA TYTSISVKQM VDDFTRLAED PVKASVALND
QYHYLTASTY DQIAALEKQG DATGAAQIAV EAFSKAMDER TGEIARNEGI ILAGWRDIKS
MINGAIEAVG SFGATAGPAE VVARMLANKQ ARNPLGTWDA DDEADLQKAI AARDAAVKTA
RDKASQSEQQ QQLIDAKRWY ATWNEQFATP AEKRVKAVNE YLDKTAALNL SPEQQLADEQ
KINDKDKDKT GRKGGTGLVD RAELTGEVQA VKDALAQELS AVDGARKVLD SQYKGGALSI
TDYYTLDRNL LAQAATDHID AATKEAALIV QGMNNRNLSA VQRAQLANQE RKALADGGKA
VEDFFQKVAQ SAAQEDEVWD KYGKSQLDAM QKQIDSANQQ QQSLRDQIDT FGMTKAAIDD
LKASRADDTV AALEQGRAIA LLQGNLADTK SWDEAIAKAK SLSNALHGVA SDQATLDDLA
QAKKQQDDLV KSWQSTIDGI GTDFHNGFLQ MLTDGKNGWS SFTKSLKNTF ETTVVDELYK
SFAKPFVVSV IAQIAGIAGG SGVQNSILQN NGMGGGNGTL NNLLSNPYGT YNNLSNGYNT
VMGWIQGYGG ASTALGASAI AGASTGALSG GGVLLGGLGG GIGGDVAASA GGYASALGSN
AYGFTAGEAG SGLGSTLGSS GGLMYGGAGL LGGLAGGALF GNKGYSNLGG SLGAMGGLAI
GASSAVAGTA IGASLGSLAG PIGAVVGMVL GSLVGSFIGG GETRYGADYT IDSNDNITKV
RGPSGGDPAA TDVQASIKNT YDSIKSLASQ LGGSIDGLGQ YSATYEISPK KGNSFVAAGF
GDLNTDVNRQ DLNGVKDSTT VLNDFSLQLQ RSVIDSLQKA NLDTPYAAVL QGVDASKLSA
DDITSLLSEL NSLKSLFDSI QKMGDDFTNL KNASVDAQTA VLSLAGGVDS FNTSATYFYQ
HFTSAAQQAN DASKSVTDQL AALGYSGIHT RDQFRNLVES LDLSTAAGQQ AYVSLLALAP
AFDNVVSSYE SAVASAYSTQ SQALQSFRDQ VDQFRQSLTT GDLSTASPEQ QYAETRQRFE
DLYGKAIGGD ATAQAGLTSA AQDFLNASKA YNASSGQYQS DLAEVMQSMD YASSSADAQL
DQLKEMVKGI VDVNTSVQTV AEAIASLQAW TSVNGSHASG LYRVPFDGYI AELHAGERVL
TANEARSLDA RLPTMQTVDF TRYRSSANDP LLQELKALRE QNAKQAEAIA KLLAAQLQQA
DAIARDGSEK MDQQTAVLQQ QRRPGQQ
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